AnalysisSystemForRadionucli.../include/armadillo_bits/op_cov_meat.hpp

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// Copyright (C) 2009-2011 National ICT Australia (NICTA)
//
// This Source Code Form is subject to the terms of the Mozilla Public
// License, v. 2.0. If a copy of the MPL was not distributed with this
// file, You can obtain one at http://mozilla.org/MPL/2.0/.
// -------------------------------------------------------------------
//
// Written by Conrad Sanderson - http://conradsanderson.id.au
// Written by Dimitrios Bouzas
//! \addtogroup op_cov
//! @{
template<typename eT>
inline
void
op_cov::direct_cov(Mat<eT>& out, const Mat<eT>& A, const uword norm_type)
{
arma_extra_debug_sigprint();
if(A.is_vec())
{
if(A.n_rows == 1)
{
out = var(trans(A), norm_type);
}
else
{
out = var(A, norm_type);
}
}
else
{
const uword N = A.n_rows;
const eT norm_val = (norm_type == 0) ? ( (N > 1) ? eT(N-1) : eT(1) ) : eT(N);
const Row<eT> acc = sum(A);
out = trans(A) * A;
out -= (trans(acc) * acc)/eT(N);
out /= norm_val;
}
}
template<typename T>
inline
void
op_cov::direct_cov(Mat< std::complex<T> >& out, const Mat< std::complex<T> >& A, const uword norm_type)
{
arma_extra_debug_sigprint();
typedef typename std::complex<T> eT;
if(A.is_vec())
{
if(A.n_rows == 1)
{
const Mat<T> tmp_mat = var(trans(A), norm_type);
out.set_size(1,1);
out[0] = tmp_mat[0];
}
else
{
const Mat<T> tmp_mat = var(A, norm_type);
out.set_size(1,1);
out[0] = tmp_mat[0];
}
}
else
{
const uword N = A.n_rows;
const eT norm_val = (norm_type == 0) ? ( (N > 1) ? eT(N-1) : eT(1) ) : eT(N);
const Row<eT> acc = sum(A);
out = trans(A) * A; // out = strans(conj(A)) * A;
out -= (trans(acc) * acc)/eT(N); // out -= (strans(conj(acc)) * acc)/eT(N);
out /= norm_val;
}
}
template<typename T1>
inline
void
op_cov::apply(Mat<typename T1::elem_type>& out, const Op<T1,op_cov>& in)
{
arma_extra_debug_sigprint();
typedef typename T1::elem_type eT;
const unwrap_check<T1> tmp(in.m, out);
const Mat<eT>& A = tmp.M;
const uword norm_type = in.aux_uword_a;
op_cov::direct_cov(out, A, norm_type);
}
//! @}