xiaoguangbin/AnalysisSystemForRadionuclide
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Merge branch 'sleepDownload' into mdc

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# Conflicts:
#	jeecg-boot-base-core/src/main/java/org/jeecg/common/email/EmailServiceManager.java
#	jeecg-boot-base-core/src/main/java/org/jeecg/common/util/TemplateUtil.java
#	jeecg-module-abnormal-alarm/src/main/java/org/jeecg/modules/redisStream/AnalysisConsumer.java
#	jeecg-module-auto-process/src/main/java/org/jeecg/modules/AutoProcessManager.java
#	jeecg-module-auto-process/src/main/java/org/jeecg/modules/EmailParsingActuator.java
#	jeecg-module-system/jeecg-system-biz/src/main/java/org/jeecg/modules/quartz/jobs/DatabaseJob.java
#	jeecg-module-system/jeecg-system-biz/src/main/java/org/jeecg/modules/quartz/jobs/ServerJob.java
This commit is contained in:
nieziyan 2024-06-06 15:53:54 +08:00
commit d940f1d6e4
17 changed files with 543 additions and 430 deletions
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115
jeecg-boot-base-core/src/main/java/org/jeecg/common/email/EmailServiceManager.java
View File

@ -1,16 +1,13 @@
package org.jeecg.common.email;
import cn.hutool.core.io.FileUtil;
import cn.hutool.core.util.ArrayUtil;
import cn.hutool.core.util.ObjectUtil;
import cn.hutool.core.util.RandomUtil;
import cn.hutool.core.util.StrUtil;
import com.google.common.collect.Lists;
import com.sun.mail.imap.IMAPStore;
import com.sun.mail.smtp.SMTPAddressFailedException;
import io.swagger.models.auth.In;
import lombok.extern.slf4j.Slf4j;
import org.apache.commons.io.Charsets;
import org.apache.commons.io.FileUtils;
import org.apache.commons.lang3.StringUtils;
import org.jeecg.common.api.dto.message.MessageDTO;
import org.jeecg.common.constant.RedisConstant;
@ -21,7 +18,6 @@ import org.jeecg.common.exception.DownloadEmailException;
import org.jeecg.common.properties.SpectrumPathProperties;
import org.jeecg.common.properties.TaskProperties;
import org.jeecg.common.util.DateUtils;
import org.jeecg.common.util.Md5Util;
import org.jeecg.common.util.RedisUtil;
import org.jeecg.modules.base.entity.postgre.SysEmail;
import org.jetbrains.annotations.NotNull;
@ -36,6 +32,9 @@ import java.io.*;
import java.net.InetSocketAddress;
import java.net.Socket;
import java.util.*;
import java.util.concurrent.*;
import java.util.concurrent.atomic.AtomicReference;
import java.util.concurrent.locks.ReentrantLock;
import java.util.stream.Collectors;
/**
@ -70,6 +69,8 @@ public class EmailServiceManager {
private Object downloadEmlLocal = new Object();
private final ReentrantLock lock = new ReentrantLock();
@NotNull
public static EmailServiceManager getInstance(){
return new EmailServiceManager();
@ -609,6 +610,105 @@ public class EmailServiceManager {
}
}
/*public File downloadEmailToEmlDir(@NotNull Message message, Integer emailCounter, Integer batchesCounter) throws MessagingException, IOException {
AtomicReference<FileOutputStream> outputStream = new AtomicReference<>();
CompletableFuture<File> future = CompletableFuture.supplyAsync(() -> {
try {
lock.lock(); // 获取锁
// 执行需要获取锁才能进行的操作
// return executeWithLock(message, emailCounter, batchesCounter);
File file = executeWithLock(message, emailCounter, batchesCounter);
outputStream.set(new FileOutputStream(file));
a(outputStream,message);
return null;
} catch (MessagingException e) {
throw new RuntimeException(e);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
} catch (IOException e) {
throw new RuntimeException(e);
} finally {
// 如果成功拿到锁 释放锁
lock.unlock();
}
});
try {
return future.get(5, TimeUnit.SECONDS);
// return future.get(5, TimeUnit.SECONDS);// 等待任务执行，超过5秒则抛出TimeoutException
} catch (InterruptedException | ExecutionException | TimeoutException e) {
future.cancel(true); // 取消任务执行
if (ObjectUtil.isNotNull(outputStream) && ObjectUtil.isNotNull(outputStream.get()))
outputStream.get().close();
log.error("下载 eml 执行超时", e);
throw new RuntimeException("下载 eml 执行超时");
}
}*/
public File executeWithLock(Message message,Integer emailCounter,Integer batchesCounter) throws MessagingException {
String subject = "";
File emlFile = null;
String status = EmailLogManager.STATUS_SUCCESS;
Date receivedDate = null;
try {
// 获取锁 设置超时
//获取发件人
final String address = ((InternetAddress) message.getFrom()[0]).getAddress();
final String from = address.substring(0,address.indexOf(StringConstant.AT));
//获取主题
subject = MimeUtility.decodeText(message.getSubject());
if(subject.contains(StringConstant.SLASH)){
subject = StringUtils.replace(subject,StringConstant.SLASH,"");
}
if(subject.contains(StringConstant.COLON)){
subject = StringUtils.replace(subject,StringConstant.COLON,"");
}
receivedDate = message.getReceivedDate();
StringBuilder fileName = new StringBuilder();
fileName.append(from);
fileName.append(StringConstant.UNDER_LINE);
fileName.append(subject);
fileName.append(StringConstant.UNDER_LINE);
fileName.append(DateUtils.formatDate(new Date(),"YYMMdd"));
fileName.append(StringConstant.UNDER_LINE);
fileName.append(DateUtils.formatDate(new Date(),"HHmmssSSS"));
fileName.append(StringConstant.UNDER_LINE);
fileName.append("receive");
fileName.append(StringConstant.UNDER_LINE);
fileName.append(DateUtils.formatDate(receivedDate,"YYMMdd"));
fileName.append(StringConstant.UNDER_LINE);
fileName.append(DateUtils.formatDate(receivedDate,"HHmmssSSS"));
fileName.append(StringConstant.UNDER_LINE);
fileName.append(emailCounter);
fileName.append(SAVE_EML_SUFFIX);
final String rootPath = spectrumPathProperties.getRootPath();
final String emlPath = spectrumPathProperties.getEmlPath();
emlFile = new File(rootPath+emlPath+File.separator+fileName);
// Thread.sleep(6000l);
// try(FileOutputStream outputStream = new FileOutputStream(emlFile)) {
// message.writeTo(outputStream);
// } catch (IOException e) {
// throw new RuntimeException(e);
// }
} catch (MessagingException | IOException e) {
// 下载邮件失败 抛出自定义邮件下载异常
status = EmailLogManager.STATUS_ERROR;
String errorMsg = StrUtil.format("The email download failed, the subject of the email is {}, the reason is {}.", subject, e.getMessage());
log.error(errorMsg);
throw new DownloadEmailException(errorMsg);
} catch (Exception e) {
log.error("",e);
} finally {
EmailLogEvent event = new EmailLogEvent(batchesCounter,Thread.currentThread().getId(),EmailLogManager.GS_TYPE_GET,status,EmailLogManager.GETIDEML,subject,DateUtils.formatDate(receivedDate,"yyyy-MM-dd HH:mm:ss:SSS"),
(Objects.isNull(emlFile)?" ":emlFile.getAbsolutePath()));
EmailLogManager.getInstance().offer(Thread.currentThread().getId(),event);
}
return emlFile;
}
public void a(AtomicReference<FileOutputStream> outputStream, Message message) throws MessagingException, IOException {
message.writeTo(outputStream.get());
}
/**
* 删除邮件
* @param message
@ -622,7 +722,7 @@ public class EmailServiceManager {
subject = MimeUtility.decodeText(message.getSubject());
receivedDate = message.getReceivedDate();
message.setFlag(Flags.Flag.DELETED,true);
// log.info("EmailServiceManager: Remove Email:{},receiveTime:{}",message.getSubject(), DateUtils.formatDate(message.getReceivedDate(),"yyyy-MM-dd HH:mm:ss"));
// log.info("EmailServiceManager: Remove Email:{},receiveTime:{}",message.getSubject(), DateUtils.formatDate(message.getReceivedDate(),"yyyy-MM-dd HH:mm:ss"));
} catch (MessagingException | UnsupportedEncodingException e) {
status = EmailLogManager.STATUS_ERROR;
log.error("Email deletion failed, the subject of the email is :{}, the reason is :{}.",subject,e.getMessage());
@ -648,6 +748,7 @@ public class EmailServiceManager {
if(null != store){
store.close();
}
log.info("EmailServiceManage资源关闭完成.");
// for(String messageId : messageIds){
// String key = RedisConstant.EMAIL_MSG_ID+StringConstant.COLON+messageId;
// redisUtil.del(key);
@ -668,7 +769,7 @@ public class EmailServiceManager {
try {
String key = RedisConstant.EMAIL_MSG_ID+StringConstant.COLON+messageId;
int numberKey = redisUtil.get(key) != null? (int) redisUtil.get(key):0;
// exist = redisUtil.hasKey(key);
// exist = redisUtil.hasKey(key);
if(numberKey >= taskProperties.getForceDeletedNumber()){
exist = true;
log.info("Check: Remove Email:{},receiveTime:{}",message.getSubject(), DateUtils.formatDate(message.getReceivedDate(),"yyyy-MM-dd HH:mm:ss"));

203
jeecg-boot-base-core/src/main/java/org/jeecg/common/util/FTPUtil.java
View File

@ -281,39 +281,74 @@ public class FTPUtil {
/**
* 写入文件，若文件或文件目录不存在则自行创建
* @param filePath 文件路径
* @param fileName 文件名称
* @param inputStream 文件输入流
* @return 返回值true/false
*/
public synchronized boolean saveFile(String filePath,String fileName,InputStream inputStream){
final FTPClient ftpClient = this.LoginFTP();
try{
final boolean flag = this.checkDirectory(ftpClient,filePath);
if(flag){
ftpClient.setFileType(FTP.BINARY_FILE_TYPE);
String encodedName = new String(fileName.getBytes(StandardCharsets.UTF_8),StandardCharsets.ISO_8859_1);
final boolean result = ftpClient.storeFile(encodedName, inputStream);
return result;
public synchronized boolean saveFile(String filePath, InputStream inputStream){
//声明目标文件
File targetFile = new File(filePath);
//创建输出流
FileOutputStream outputStream = null;
try {
//获取父级路径
File directory = targetFile.getParentFile();
//判断父级路径是否存在
if (!directory.exists()) {
directory.mkdirs();
}
}catch (IOException e){
log.error("{}文件创建失败，原因为：{}",filePath+"/"+fileName,e.getMessage());
e.printStackTrace();
return false;
}finally {
if(null != inputStream){
try {
inputStream.close();
} catch (IOException e) {
e.printStackTrace();
}
// 创建输出流对象并写入数据到文件
outputStream = new FileOutputStream(targetFile);
byte[] buffer = new byte[1024];
int length;
while ((length = inputStream.read(buffer)) > 0) {
outputStream.write(buffer, 0, length);
}
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
} catch (IOException e) {
throw new RuntimeException(e);
} finally {
// 关闭输入流和输出流
try {
ftpClient.disconnect();
if (Objects.nonNull(inputStream)) {
inputStream.close();
}
if (Objects.nonNull(outputStream)) {
outputStream.close();
}
} catch (IOException e) {
e.printStackTrace();
throw new RuntimeException(e);
}
}
return false;
return true;
// final FTPClient ftpClient = this.LoginFTP();
// try{
// final boolean flag = this.checkDirectory(ftpClient,filePath);
// if(flag){
// ftpClient.setFileType(FTP.BINARY_FILE_TYPE);
// String encodedName = new String(fileName.getBytes(StandardCharsets.UTF_8),StandardCharsets.ISO_8859_1);
// final boolean result = ftpClient.storeFile(encodedName, inputStream);
// return result;
// }
// }catch (IOException e){
// log.error("{}文件创建失败，原因为：{}",filePath+"/"+fileName,e.getMessage());
// e.printStackTrace();
// return false;
// }finally {
// if(null != inputStream){
// try {
// inputStream.close();
// } catch (IOException e) {
// e.printStackTrace();
// }
// }
// try {
// ftpClient.disconnect();
// } catch (IOException e) {
// e.printStackTrace();
// }
// }
// return false;
}
/**
@ -458,65 +493,85 @@ public class FTPUtil {
/*
* 将源FTP路径的文件保存为指定路径的临时文件
* */
public File downloadFile(String fromPath, String toPath) {
FTPClient ftpClient = null;
InputStream inputStream = null;
// 声明一个临时文件
File tempFile = null;
try {
ftpClient = LoginFTP();
// 切换被动模式
ftpClient.enterLocalPassiveMode();
ftpClient.setFileType(FTPClient.BINARY_FILE_TYPE);
// 设置编码，当文件中存在中文且上传后文件乱码时可使用此配置项
ftpClient.setControlEncoding("UTF-8");
ftpClient.setFileTransferMode(FTPClient.STREAM_TRANSFER_MODE);
inputStream = ftpClient.retrieveFileStream(fromPath);
if (Objects.nonNull(inputStream)) {
tempFile = File.createTempFile(toPath, null);
// 将FTP文件的输入流复制给临时文件
FileUtils.copyInputStreamToFile(inputStream, tempFile);
}
return tempFile;
} catch (IOException e) {
e.printStackTrace();
return null;
} finally {
try {
if (ObjectUtil.isNotNull(ftpClient))
ftpClient.disconnect();
if (ObjectUtil.isNotNull(inputStream))
inputStream.close();
} catch (IOException e) {
e.printStackTrace();
}
public File downloadFile(String fromPath) {
//获取路径下的文件信息
File tempFile = new File(fromPath);
//判断文件是否存在
if (!tempFile.exists()) {
tempFile = null;
}
return tempFile;
// FTPClient ftpClient = null;
// InputStream inputStream = null;
// // 声明一个临时文件
// File tempFile = null;
// try {
// //连接ftp
// ftpClient = LoginFTP();
// // 切换被动模式
// ftpClient.enterLocalPassiveMode();
// ftpClient.setFileType(FTPClient.BINARY_FILE_TYPE);
// // 设置编码，当文件中存在中文且上传后文件乱码时可使用此配置项
// ftpClient.setControlEncoding("UTF-8");
// ftpClient.setFileTransferMode(FTPClient.STREAM_TRANSFER_MODE);
// inputStream = ftpClient.retrieveFileStream(fromPath);
// if (Objects.nonNull(inputStream)) {
// tempFile = File.createTempFile(toPath, null);
// // 将FTP文件的输入流复制给临时文件
// FileUtils.copyInputStreamToFile(inputStream, tempFile);
// }
// return tempFile;
// } catch (IOException e) {
// e.printStackTrace();
// return null;
// } finally {
// try {
// if (ObjectUtil.isNotNull(ftpClient))
// ftpClient.disconnect();
// if (ObjectUtil.isNotNull(inputStream))
// inputStream.close();
// } catch (IOException e) {
// e.printStackTrace();
// }
// }
}
/*
* 将源FTP路径的文件转换为文件流
* */
public InputStream downloadFileStream(String fromPath) {
FTPClient ftpClient = null;
//获取路径下的文件信息
File tempFile = new File(fromPath);
InputStream inputStream = null;
try {
ftpClient = LoginFTP();
// 切换被动模式
ftpClient.enterLocalPassiveMode();
ftpClient.setFileType(FTPClient.BINARY_FILE_TYPE);
// 设置编码，当文件中存在中文且上传后文件乱码时可使用此配置项
ftpClient.setControlEncoding("UTF-8");
ftpClient.setFileTransferMode(FTPClient.STREAM_TRANSFER_MODE);
return ftpClient.retrieveFileStream(fromPath);
} catch (IOException e) {
e.printStackTrace();
return null;
} finally {
try {
if (ObjectUtil.isNotNull(ftpClient))
ftpClient.disconnect();
} catch (IOException e) {
e.printStackTrace();
//判断文件是否存在
if (tempFile.exists()) {
inputStream = new FileInputStream(tempFile);
}
return inputStream;
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
}
// FTPClient ftpClient = null;
// try {
// ftpClient = LoginFTP();
// // 切换被动模式
// ftpClient.enterLocalPassiveMode();
// ftpClient.setFileType(FTPClient.BINARY_FILE_TYPE);
// // 设置编码，当文件中存在中文且上传后文件乱码时可使用此配置项
// ftpClient.setControlEncoding("UTF-8");
// ftpClient.setFileTransferMode(FTPClient.STREAM_TRANSFER_MODE);
// return ftpClient.retrieveFileStream(fromPath);
// } catch (IOException e) {
// e.printStackTrace();
// return null;
// } finally {
// try {
// if (ObjectUtil.isNotNull(ftpClient))
// ftpClient.disconnect();
// } catch (IOException e) {
// e.printStackTrace();
// }
// }
}
}

6
jeecg-module-auto-process/src/main/java/org/jeecg/modules/AutoProcessManager.java
View File

@ -1,5 +1,6 @@
package org.jeecg.modules;
import cn.hutool.core.util.RandomUtil;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
import org.jeecg.common.constant.RedisConstant;
@ -15,7 +16,6 @@ import org.jeecg.modules.spectrum.SpectrumServiceQuotes;
import org.springframework.stereotype.Component;
import org.springframework.util.CollectionUtils;
import java.io.*;
import java.util.*;
import java.util.concurrent.TimeUnit;
@ -158,7 +158,7 @@ public class AutoProcessManager{
//如果这时邮箱线程里已有执行的线程则设置停止标记
if(emailExecThreadMap.containsKey(email.getId())){
EmailParsingActuator actuator = emailExecThreadMap.get(email.getId());
actuator.setStop(true);
actuator.setThreadSleep(true);
actuator.setStopTime(new Date());
}
log.info("{}邮箱测试连接失败，emailMap删除此邮箱数据，emailExecThreadMap设置线程停止标记",email.getUsername());
@ -235,7 +235,7 @@ public class AutoProcessManager{
if(testFlag){
if (emailExecThreadMap.containsKey(databaseEmail.getId())) {
EmailParsingActuator actuator = emailExecThreadMap.get(databaseEmail.getId());
actuator.setStop(false);
actuator.setThreadSleep(false);
log.info("{}邮箱重新加入监测队列",databaseEmail.getUsername());
} else {
databaseEmail.setNewEmailFlag(true);

24
jeecg-module-auto-process/src/main/java/org/jeecg/modules/EmailParsingActuator.java
View File

@ -36,6 +36,8 @@ public class EmailParsingActuator extends Thread{
@Setter @Getter
private boolean isStop;
@Setter @Getter
private boolean threadSleep;
@Setter @Getter
private Date stopTime;
public void init(EmailProperties emailProperties,SpectrumServiceQuotes spectrumServiceQuotes,
@ -62,8 +64,17 @@ public class EmailParsingActuator extends Thread{
@Override
public void run() {
for(;;){
String nowDate = DateUtils.formatDate(new Date(), "yyyy-MM-dd HH:mm:ss");
if (threadSleep) {
log.info(nowDate + " " +this.emailProperties.getName()+" EmailParsingActuator is sleep!");
try {
Thread.sleep(1000L);
} catch (InterruptedException e) {
log.error("Thread sleep error");
}
continue;
}
if (isStop) {
String nowDate = DateUtils.formatDate(new Date(), "yyyy-MM-dd HH:mm:ss");
log.info(nowDate + " " +this.emailProperties.getName()+" EmailParsingActuator is Stop!");
closeResource();
return;
@ -80,13 +91,11 @@ public class EmailParsingActuator extends Thread{
//检验获取的邮件是否在之前删除失败列表中，若在直接调用邮件API删除，并且此次数组里元素也删除
for(int i=messages.length-1;i>=0;i--){
if (null == messages[i].getHeader("Message-ID")) {
System.out.println("Message ID是空值信息！！！！！！！");
messages = ArrayUtils.remove(messages, i);
continue;
}
if (!messages[i].isExpunged()){
String messageId = ((MimeMessage) messages[i]).getMessageID();
System.out.println("正常获取到的Message ID是："+messageId);
final boolean exist = emailServiceManager.check(messages[i],messageId);
messageIds.add(messageId);
if(exist){
@ -106,15 +115,14 @@ public class EmailParsingActuator extends Thread{
poolExecutor.execute(spectrumParsingActuator);
}
taskLatch.await();
log.info("EmailParsingActuator本次{}封邮件处理完成", messages.length);
}
}
} catch (MessagingException e) {
System.out.println("捕获MessagingException！！！！！！！！");
} catch (Exception e) {
log.error("EmailParsingActuator has exception: {}", e.getMessage());
log.info("Mail-Parsing线程池资源关闭...");
closeResource();
throw new RuntimeException(e);
} catch (Exception e) {
closeResource();
log.error(""+e);
} finally {
//清除本批次邮件日志缓存
EmailLogManager.getInstance().clear();

3
jeecg-module-auto-process/src/main/java/org/jeecg/modules/service/impl/GardsSampleDataServiceImpl.java
View File

@ -84,7 +84,8 @@ public class GardsSampleDataServiceImpl extends ServiceImpl<GardsSampleDataMappe
LambdaQueryWrapper<GardsSampleData> queryWrapper = new LambdaQueryWrapper<>();
queryWrapper.eq(GardsSampleData::getInputFileName,inputFileName);
final GardsSampleData sampleData = this.getOne(queryWrapper);
if(Objects.nonNull(sampleData) && !SampleStatus.COMPLETE.getValue().equals(sampleData.getStatus())){
if(Objects.nonNull(sampleData) && !SampleStatus.COMPLETE.getValue().equals(sampleData.getStatus())
&& !SampleStatus.INTERACTIVE.getValue().equals(sampleData.getStatus())){
this.baseMapper.updateStatus(status,inputFileName);
}
}

2
jeecg-module-auto-process/src/main/java/org/jeecg/modules/spectrum/AbstractSpectrumHandler.java
View File

@ -316,7 +316,7 @@ public abstract class AbstractSpectrumHandler extends AbstractChain {
ex.printStackTrace();
}
} else if(SpectrumSource.FROM_FILE_SOURCE.getSourceType().equals(spectrumSource) && (e instanceof FileRepeatException)){
this.spectrumFile.delete();
this.spectrumFile.delete(); // TODO 删除原始谱文件
} else if (SpectrumSource.FORM_FILE_UNDEL.getSourceType().equals(spectrumSource) && !(e instanceof FileRepeatException)) {
try {
if (isDateFormatErr) {

20
jeecg-module-beta-gamma-analyser/src/main/java/org/jeecg/common/util/GammaFileUtil.java
View File

@ -70,9 +70,9 @@ public class GammaFileUtil extends AbstractLogOrReport {
//如果功能是人工交互模块则从ftp获取文件内容
File file = null;
if (sysSource.equals("BetaGamma")) {
file = ftpUtil.downloadFile(fromPath, "betaGamma");
file = ftpUtil.downloadFile(fromPath);
if (Objects.isNull(file)) {
result.error500("ftp file can't find");
result.error500("file can't find");
return false;
}
} else if (sysSource.equals("AUTO")) {//如果是自动处理则从本地文件中获取文件内容
@ -265,7 +265,7 @@ public class GammaFileUtil extends AbstractLogOrReport {
try {
String lcFileName = prefixName+"_"+subFileName + ".lc";
String fromPathLc = pathName + StringPool.SLASH + lcFileName;
lcFile = ftpUtil.downloadFile(fromPathLc, "betaGamma");
lcFile = ftpUtil.downloadFile(fromPathLc);
if (Objects.nonNull(lcFile)) {
List<String> readLinesLc = FileUtils.readLines(lcFile, "UTF-8");
//得到行数据处理后的数据结果
@ -275,7 +275,7 @@ public class GammaFileUtil extends AbstractLogOrReport {
}
String scacFileName = prefixName+"_"+subFileName + ".scac";
String fromPathScac = pathName + StringPool.SLASH + scacFileName;
scacFile = ftpUtil.downloadFile(fromPathScac, "betaGamma");
scacFile = ftpUtil.downloadFile(fromPathScac);
if (Objects.nonNull(scacFile)) {
List<String> readLinesScac = FileUtils.readLines(scacFile, "UTF-8");
//得到行数据处理后的数据结果
@ -298,10 +298,6 @@ public class GammaFileUtil extends AbstractLogOrReport {
try {
if (ObjectUtil.isNotNull(inputStreamBase))
inputStreamBase.close();
if (ObjectUtil.isNotNull(lcFile))
lcFile.delete();
if (ObjectUtil.isNotNull(scacFile))
scacFile.delete();
} catch (IOException e) {
e.printStackTrace();
}
@ -3234,8 +3230,10 @@ public class GammaFileUtil extends AbstractLogOrReport {
File sampleTmp = null;
try {
sampleTmp = new File(fileAnlyse.getTmpFilePath());
if (Objects.nonNull(sampleTmp)) {
bRet = ftpUtil.saveFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + middleData.analyses_save_filePath.substring(0, middleData.analyses_save_filePath.lastIndexOf(StringPool.SLASH)), middleData.analyses_save_filePath.substring(middleData.analyses_save_filePath.lastIndexOf(StringPool.SLASH)+1), new FileInputStream(sampleTmp));
//sample文件的存储路径
String saveSamplePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + middleData.analyses_save_filePath;
if (Objects.nonNull(sampleTmp) && !saveSamplePath.equals(fileAnlyse.getTmpFilePath().replace(StringPool.BACK_SLASH, StringPool.SLASH))) {
bRet = ftpUtil.saveFile(saveSamplePath, new FileInputStream(sampleTmp));
}
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
@ -4369,7 +4367,7 @@ public class GammaFileUtil extends AbstractLogOrReport {
public File analyzeFile(String path, String fileName) {
path = path.replace("\\", "/");
String fromPath = path + StringPool.SLASH + fileName;
return ftpUtil.downloadFile(fromPath, "betaGamma");
return ftpUtil.downloadFile(fromPath);
}
public List<String> readLine(String filePath) {

19
jeecg-module-log-manage/src/main/java/org/jeecg/modules/controller/LogManageController.java
View File

@ -2,7 +2,9 @@ package org.jeecg.modules.controller;
import io.swagger.annotations.Api;
import io.swagger.annotations.ApiOperation;
import org.jeecg.common.api.vo.Result;
import org.jeecg.common.util.FTPUtil;
import org.jeecg.modules.base.bizVo.FileVo;
import org.jeecg.modules.entity.FileInfo;
import org.jeecg.modules.entity.LogManage;
import org.jeecg.modules.service.ILogManageService;
@ -20,31 +22,24 @@ import java.util.List;
@Api(value = "日志管理", tags = "日志管理")
public class LogManageController {
@Autowired
private FTPUtil ftpUtil;
@Autowired
private ILogManageService logManageService;
@GetMapping("findFtpFolders")
@ApiOperation(value = "查询日志文件夹树形结构", notes = "查询日志文件夹树形结构")
public List<LogManage> findFtpFolders(String workPath) {
return logManageService.findFtpFolders(workPath);
return logManageService.fileTree(workPath);
}
/**
* 查询目录下文件内容
* @param path
* @return
*/
@GetMapping("findFiles")
@ApiOperation(value = "查询目录下文件内容", notes = "查询目录下文件内容")
public List<FileInfo> findFiles(String path) {
return logManageService.findFiles(path);
public Result<?> findFiles(String path, FileVo fileVo) {
return logManageService.findFiles(path, fileVo);
}
@PostMapping("downloadFile")
@ApiOperation(value = "ftp文件下载", notes = "ftp文件下载")
public void downloadFile(String localPath, String fileName, HttpServletResponse response) {
ftpUtil.downloadFTPFile(localPath, response);
public void downloadFile(String localPath, HttpServletResponse response) {
logManageService.downloadFile(localPath, response);
}
}

12
jeecg-module-log-manage/src/main/java/org/jeecg/modules/service/ILogManageService.java
View File

@ -1,24 +1,24 @@
package org.jeecg.modules.service;
import org.jeecg.common.api.vo.Result;
import org.jeecg.modules.base.bizVo.FileVo;
import org.jeecg.modules.entity.FileInfo;
import org.jeecg.modules.entity.LogManage;
import javax.servlet.http.HttpServletResponse;
import java.util.List;
public interface ILogManageService {
/**
* 查询日志文件夹树形结构
* @param workPath
* @return
*/
List<LogManage> findFtpFolders(String workPath);
List<LogManage> fileTree(String workPath);
/**
* 查询目录下文件内容
* @param path
* @return
*/
List<FileInfo> findFiles(String path);
Result<?> findFiles(String path, FileVo fileVo);
void downloadFile(String localPath, HttpServletResponse response);
}

263
jeecg-module-log-manage/src/main/java/org/jeecg/modules/service/impl/LogManageServiceImpl.java
View File

@ -1,192 +1,159 @@
package org.jeecg.modules.service.impl;
import cn.hutool.core.collection.CollUtil;
import cn.hutool.core.collection.ListUtil;
import cn.hutool.core.date.DateTime;
import cn.hutool.core.date.DateUtil;
import cn.hutool.core.io.FileUtil;
import cn.hutool.core.util.ArrayUtil;
import cn.hutool.core.util.ObjectUtil;
import cn.hutool.core.util.StrUtil;
import com.baomidou.mybatisplus.core.toolkit.CollectionUtils;
import com.baomidou.mybatisplus.core.toolkit.StringPool;
import com.baomidou.mybatisplus.extension.plugins.pagination.Page;
import lombok.extern.slf4j.Slf4j;
import org.apache.commons.net.ftp.FTPClient;
import org.apache.commons.net.ftp.FTPFile;
import org.jeecg.common.api.vo.Result;
import org.jeecg.common.constant.Prompt;
import org.jeecg.common.properties.SpectrumPathProperties;
import org.jeecg.common.util.DateUtils;
import org.jeecg.common.util.FTPUtil;
import org.jeecg.common.util.ExportUtil;
import org.jeecg.common.util.PageUtil;
import org.jeecg.modules.base.bizVo.FileVo;
import org.jeecg.modules.entity.FileInfo;
import org.jeecg.modules.entity.LogManage;
import org.jeecg.modules.service.ILogManageService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import javax.servlet.http.HttpServletResponse;
import java.io.File;
import java.io.IOException;
import java.io.InputStream;
import java.io.OutputStream;
import java.util.*;
import java.util.stream.Collectors;
@Service("logManageService")
@Slf4j
@Service
public class LogManageServiceImpl implements ILogManageService {
@Autowired
private FTPUtil ftpUtil;
private SpectrumPathProperties spectrumPath;
@Override
public List<LogManage> findFtpFolders(String workPath) {
public List<LogManage> fileTree(String workPath) {
List<LogManage> result = new ArrayList<>();
FTPClient ftpClient = ftpUtil.LoginFTP();
if(Objects.isNull(ftpClient)){
throw new RuntimeException("ftp connection failed!");
workPath = spectrumPath.getRootPath() + StringPool.SLASH + workPath;
List<File> files = ListUtil.toList(FileUtil.ls(workPath));
if (CollUtil.isEmpty(files)) return result;
int num = 1;
for (File file : files) {
LogManage logManage = new LogManage();
logManage.setName(file.getName());
logManage.setOrderNum(num++);
logManage.setPath(workPath + StringPool.SLASH + file.getName());
List<LogManage> children = this.getChildren(logManage);
logManage.setHashChild(CollUtil.isNotEmpty(children));
logManage.setChildren(children);
result.add(logManage);
}
try {
//切换被动模式
ftpClient.enterLocalPassiveMode();
ftpClient.setFileType(FTPClient.BINARY_FILE_TYPE);
// 设置编码，当文件中存在中文且上传后文件乱码时可使用此配置项
ftpClient.setControlEncoding("UTF-8");
ftpClient.setFileTransferMode(FTPClient.STREAM_TRANSFER_MODE);
//切换工作文件路径
workPath = ftpUtil.getFtpRootPath()+StringPool.SLASH+workPath;
ftpClient.changeWorkingDirectory(workPath);
List<FTPFile> ftpFiles = Arrays.asList(ftpClient.listDirectories());
if (CollectionUtils.isNotEmpty(ftpFiles)){
int num =1;
for (FTPFile ftpFile:ftpFiles) {
LogManage logManage = new LogManage();
logManage.setName(ftpFile.getName());
logManage.setOrderNum(num);
logManage.setParentNum(0);
logManage.setPath(workPath + StringPool.SLASH + ftpFile.getName());
result.add(logManage);
num++;
}
}
if (CollectionUtils.isNotEmpty(result)){
List<LogManage> list = new LinkedList<>();
for (LogManage logManage:result) {
list = this.findDirectory(ftpClient, list, logManage.getOrderNum(), workPath + StringPool.SLASH + logManage.getName() , logManage.getName());
ftpClient.changeToParentDirectory();
}
result.addAll(list);
}
} catch (IOException e) {
throw new RuntimeException(e);
} finally {
try {
if (ftpClient != null){
ftpClient.disconnect();
}
} catch (IOException e) {
throw new RuntimeException(e);
}
}
result = this.LogManageTree(result);
return result;
}
@Override
public List<FileInfo> findFiles(String path) {
List<FileInfo> result = new ArrayList<>();
FTPClient ftpClient = ftpUtil.LoginFTP();
if (Objects.isNull(ftpClient)){
throw new RuntimeException("ftp connection failed!");
public Result<?> findFiles(String path, FileVo fileVo) {
String name = fileVo.getName();
Integer pageNo = fileVo.getPageNo();
Integer pageSize = fileVo.getPageSize();
Page<FileInfo> page = new Page<>(pageNo, pageSize);
List<File> files = CollUtil.toList(FileUtil.ls(path));
// 文件名过滤
if (StrUtil.isNotBlank(name))
files = files.stream().filter(file -> StrUtil.containsIgnoreCase(file.getName(), name))
.collect(Collectors.toList());
page.setTotal(files.size());
// 分页
files = PageUtil.page(pageNo, pageSize, files);
List<FileInfo> records = new ArrayList<>();
for (File file : files) {
if (FileUtil.isDirectory(file)) continue;
FileInfo fileInfo = new FileInfo();
fileInfo.setFileName(file.getName());
fileInfo.setFilePath(path + StringPool.SLASH + file.getName());
fileInfo.setFileSize(FileUtil.readableFileSize(file));
fileInfo.setFileDate(DateUtil.formatDateTime(FileUtil.lastModifiedTime(file)));
records.add(fileInfo);
}
page.setRecords(records);
return Result.OK(page);
}
@Override
public void downloadFile(String localPath, HttpServletResponse response) {
OutputStream outputStream = null;
InputStream inputStream = null;
try {
//切换被动模式
ftpClient.enterLocalPassiveMode();
ftpClient.setFileType(FTPClient.BINARY_FILE_TYPE);
// 设置编码，当文件中存在中文且上传后文件乱码时可使用此配置项
ftpClient.setControlEncoding("UTF-8");
ftpClient.setFileTransferMode(FTPClient.STREAM_TRANSFER_MODE);
//切换工作文件路径
ftpClient.changeWorkingDirectory(path);
List<FTPFile> ftpFiles = Arrays.asList(ftpClient.listFiles());
if (CollectionUtils.isNotEmpty(ftpFiles)){
for (FTPFile ftpFile:ftpFiles) {
if (ftpFile.isFile()){
FileInfo fileInfo = new FileInfo();
fileInfo.setFileName(ftpFile.getName());
fileInfo.setFilePath(path + StringPool.SLASH + ftpFile.getName());
fileInfo.setFileSize(String.format("%.2f", Double.valueOf(Double.valueOf(ftpFile.getSize())/1024)) + "KB");
fileInfo.setFileDate(DateUtils.formatDate(ftpFile.getTimestamp(),"yyyy-MM-dd"));
result.add(fileInfo);
}
}
// 如果是目录 则直接退出方法
if (FileUtil.isDirectory(localPath)) return;
// 判断是否存在此文件
if (!FileUtil.exist(localPath)) return;
// 获取文件名
String fileName = FileUtil.getName(localPath);
inputStream = FileUtil.getInputStream(localPath);
outputStream = ExportUtil.stream(response, fileName);
// 缓冲区大小
byte[] buffer = new byte[4096];
int bytesRead;
// 将文件输出流写入到输出流中
while ((bytesRead = inputStream.read(buffer)) != -1) {
outputStream.write(buffer, 0, bytesRead);
}
} catch (IOException e) {
throw new RuntimeException(e);
log.error("文件{}下载失败 :{}", localPath, e.getMessage());
} finally {
try {
if (ftpClient != null){
ftpClient.disconnect();
}
if (ObjectUtil.isNotNull(inputStream))inputStream.close();
if (ObjectUtil.isNotNull(outputStream))outputStream.close();
} catch (IOException e) {
throw new RuntimeException(e);
e.printStackTrace();
}
}
return result;
}
/**
* 遍历查询当前路径下的文件夹信息
* @param ftpClient
* @param list
* @param filePath 以"/"开始和结束
* @return
* 获取当前目录节点所有子孙节点Tree
*/
public List<LogManage> findDirectory(FTPClient ftpClient, List<LogManage> list, Integer parentNum, String filePath, String fileName){
try {
//切换被动模式
ftpClient.enterLocalPassiveMode();
ftpClient.changeWorkingDirectory(fileName);
List<FTPFile> ftpFiles = Arrays.asList(ftpClient.listDirectories());
if (CollectionUtils.isNotEmpty(ftpFiles)){
int num = 1;
for (FTPFile file : ftpFiles) {
if (file.isDirectory()) {
LogManage logManage = new LogManage();
logManage.setName(file.getName());
logManage.setOrderNum(parentNum*10+num);
logManage.setParentNum(parentNum);
logManage.setPath(filePath + StringPool.SLASH + file.getName());
list.add(logManage);
// 需要加此判断。否则，ftp默认将‘项目文件所在目录之下的目录（./）’与‘项目文件所在目录向上一级目录下的目录（../）’都纳入递归，这样下去就陷入一个死循环了。需将其过滤掉。
if (!".".equals(file.getName()) && !"..".equals(file.getName())) {
findDirectory(ftpClient, list, parentNum*10+num, filePath + StringPool.SLASH + file.getName(), file.getName());
ftpClient.changeToParentDirectory();
}
num++;
}
}
}
} catch (IOException e) {
throw new RuntimeException(e);
}
return list;
}
/**
* 将当前的文件夹转换成树形结构
* @param logManages
* @return
*/
public List<LogManage> LogManageTree(List<LogManage> logManages){
if (logManages == null) {
return null;
}
private List<LogManage> getChildren(LogManage parent){
List<LogManage> result = new LinkedList<>();
Integer TOP_NODE_ID = 0;
logManages.forEach(logManage -> {
Integer pid = logManage.getParentNum();
if (pid == null || TOP_NODE_ID.equals(pid)) {
result.add(logManage);
return;
}
for (LogManage manage : logManages) {
Integer id = manage.getOrderNum();
if (id != null && id.equals(pid)) {
if (manage.getChildren() == null) {
manage.initChildren();
}
logManage.setHashParent(true);
manage.getChildren().add(logManage);
manage.setHashChild(true);
return;
}
}
});
String parentPath = parent.getPath();
// 如果是文件 则直接返回空集合
if (FileUtil.isFile(parentPath)) return result;
List<File> files = ListUtil.toList(FileUtil.ls(parentPath));
// 如果当前目录不存在子文件 则返回空集合
if (CollUtil.isEmpty(files)) return result;
int parentOrderNum = parent.getOrderNum();
int num = parentOrderNum * 10 + 1;
for (File file : files) {
// 过滤掉文件 只收集目录
if (FileUtil.isFile(file)) continue;
LogManage logManage = new LogManage();
logManage.setName(file.getName());
logManage.setOrderNum(num++);
logManage.setHashParent(true);
logManage.setParentNum(parentOrderNum);
logManage.setPath(parentPath + StringPool.SLASH + file.getName());
List<LogManage> children = getChildren(logManage);
logManage.setHashChild(CollUtil.isNotEmpty(children));
logManage.setChildren(children);
result.add(logManage);
}
return result;
}
}

13
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/common/util/PHDFileUtil.java
View File

@ -817,7 +817,7 @@ public class PHDFileUtil extends AbstractLogOrReport {
File file = null;
try {
String fromPath = filePath + StringPool.SLASH + sampleFileName;
file = ftpUtil.downloadFile(fromPath, "betaGamma");
file = ftpUtil.downloadFile(fromPath);
//加载sampleFile内容
EnergySpectrumStruct struct = EnergySpectrumHandler.getSourceData(file.getAbsolutePath());
//获取所需要的数据
@ -841,9 +841,6 @@ public class PHDFileUtil extends AbstractLogOrReport {
}catch (Exception e){
e.printStackTrace();
return map;
}finally {
if (ObjectUtil.isNotNull(file))
file.delete();
}
}
@ -852,7 +849,7 @@ public class PHDFileUtil extends AbstractLogOrReport {
File file = null;
try {
String fromPath = filePath + StringPool.SLASH + fileName;
file = ftpUtil.downloadFile(fromPath, "betaGamma");
file = ftpUtil.downloadFile(fromPath);
EnergySpectrumStruct sourceData = EnergySpectrumHandler.getSourceData(file.getAbsolutePath());
String systemType = sourceData.system_type;
String dataType = sourceData.data_type;
@ -886,9 +883,6 @@ public class PHDFileUtil extends AbstractLogOrReport {
}catch (Exception e){
e.printStackTrace();
return path.toString();
}finally {
if (ObjectUtil.isNotNull(file))
file.delete();
}
}
@ -1120,9 +1114,6 @@ public class PHDFileUtil extends AbstractLogOrReport {
if (Objects.nonNull(inputStream)){
inputStream.close();
}
if (Objects.nonNull(file)) {
file.delete();
}
} catch (IOException e) {
throw new RuntimeException(e);
}

111
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/service/impl/GammaServiceImpl.java
View File

@ -180,7 +180,7 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
return result;
}
// 切割数据库存储的文件路径获取路径信息
String pathName = ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + sampleFilePath.substring(0, sampleFilePath.lastIndexOf(StringPool.SLASH));
String pathName = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + sampleFilePath.substring(0, sampleFilePath.lastIndexOf(StringPool.SLASH));
// 切割数据库存储的文件路径获取文件名称
String fileName = sampleFilePath.substring(sampleFilePath.lastIndexOf(StringPool.SLASH) + 1);
// 声明phd实体类
@ -598,7 +598,7 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
Map<String, Object> map = new HashMap<>();
Cache<String, PHDFile> phdCache = localCache.getPHDCache();
// 上传文件路径
String path = ftpUtil.getFtpRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
String path = spectrumPathProperties.getRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
// 获取当前角色的颜色配置
Map<String, String> colorMap = sysUserColorService.initColor(userName);
PHDFile phd = phdCache.getIfPresent(fileName + StringPool.DASH + userName);
@ -671,12 +671,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
String key = fileName + StrUtil.DASHED + username;
Cache<String, PHDFile> phdCache = localCache.getPHDCache();
PHDFile phdFile = phdCache.getIfPresent(key);
if (StringUtils.isNotBlank(phdFile.getTmpFilePath())) {
File file = new File(phdFile.getTmpFilePath());
if (Objects.nonNull(file)) {
file.delete();
}
}
// 删除指定key的Cache
localCache.deletePHDCache(key);
}
@ -743,8 +737,8 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
result.error500("The comparison file path does not exist");
return result;
}
compareFilePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + compareFilePath;
File compareFile = ftpUtil.downloadFile(compareFilePath, "betaGamma");
compareFilePath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + compareFilePath;
File compareFile = ftpUtil.downloadFile(compareFilePath);
if (Objects.isNull(compareFile)) {
result.error500("The comparison file path does not exist");
return result;
@ -756,7 +750,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
result.setSuccess(true);
result.setResult(chartDataList);
}
compareFile.delete();
return result;
}
@ -776,9 +769,9 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
long m_nCount = phd.getSpec().getNum_g_channel();
List<Double> vEnergy = phd.getVEnergy();
//加载compare文件
String compareFilePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
String compareFilePath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
String fromPath = compareFilePath + StringPool.SLASH + compareFileName;
File compareFile = ftpUtil.downloadFile(fromPath, "betaGamma");
File compareFile = ftpUtil.downloadFile(fromPath);
if (Objects.nonNull(compareFile)) {
// 获取Compare数据
List<Long> m_vecCompare = gammaFileUtil.loadCompareData(compareFile, userName, m_nCount, result);
@ -787,7 +780,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
result.setSuccess(true);
result.setResult(chartDataList);
}
compareFile.delete();
}
return result;
}
@ -827,8 +819,8 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
result.error500("The comparison file path does not exist");
return result;
}
stripFilePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + stripFilePath;
File stripFile = ftpUtil.downloadFile(stripFilePath, "betaGamma");
stripFilePath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + stripFilePath;
File stripFile = ftpUtil.downloadFile(stripFilePath);
if (Objects.isNull(stripFile)) {
result.error500("The comparison file path does not exist");
return result;
@ -843,7 +835,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
result.setSuccess(true);
result.setResult(stripMap);
}
stripFile.delete();
return result;
}
@ -877,9 +868,9 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
m_vCount.add(0L);
}
//加载strip文件
String stripFilePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
String stripFilePath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
String fromPath = stripFilePath + StringPool.SLASH + stripFileName;
File stripFile = ftpUtil.downloadFile(fromPath, "betaGamma");
File stripFile = ftpUtil.downloadFile(fromPath);
if (Objects.nonNull(stripFile)) {
// 获取Compare数据
List<Long> m_vecCompare = gammaFileUtil.loadCompareData(stripFile, userName, m_nCount, result);
@ -891,7 +882,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
result.setSuccess(true);
result.setResult(stripMap);
}
stripFile.delete();
}
return result;
}
@ -3026,9 +3016,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
if (Objects.nonNull(inputStream)) {
inputStream.close();
}
if (Objects.nonNull(tmpFile)) {
tmpFile.delete();
}
} catch (IOException e) {
throw new RuntimeException(e);
}
@ -3300,9 +3287,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
if (Objects.nonNull(inputStream)) {
inputStream.close();
}
if (Objects.nonNull(tmpFile)) {
tmpFile.delete();
}
} catch (IOException e) {
throw new RuntimeException(e);
}
@ -3596,9 +3580,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
if (Objects.nonNull(inputStream)) {
inputStream.close();
}
if (Objects.nonNull(tmpFile)) {
tmpFile.delete();
}
} catch (IOException e) {
throw new RuntimeException(e);
}
@ -3961,7 +3942,7 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
if (StringUtils.isBlank(reportPath)) {
throw new RuntimeException("The automatic handler generated report does not exist！");
}
String pathFileName = ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + reportPath + ".txt";
String pathFileName = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + reportPath + ".txt";
InputStream inputStream = null;
ServletOutputStream outputStream = null;
try {
@ -3995,7 +3976,7 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
public void exportARR(Integer sampleId, HttpServletResponse response) {
// 获取自动处理生成的报告地址
String reportPath = spectrumAnalysisMapper.viewARR(sampleId);
String pathFileName = ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + reportPath + ".txt";
String pathFileName = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + reportPath + ".txt";
InputStream inputStream = null;
ServletOutputStream outputStream = null;
try {
@ -4595,7 +4576,7 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
if (StringUtils.isBlank(logPath)) {
throw new RuntimeException("The log generated by the automatic processor does not exist！");
}
String pathFileName = ftpUtil.getFtpRootPath() + spectrumPathProperties.getLogPath() + StringPool.SLASH + logPath;
String pathFileName = spectrumPathProperties.getRootPath() + spectrumPathProperties.getLogPath() + StringPool.SLASH + logPath;
InputStream inputStream = null;
ServletOutputStream outputStream = null;
try {
@ -4810,47 +4791,40 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
phd.setStatus("R");
//分析成功后存储日志文件和报告文件
String rootPath = spectrumPathProperties.getRootPath();
// {
// File baselineFile = new File(rootPath+middleData.analyses_baseline_absolute_filePath);
// try {
// FileInputStream in = new FileInputStream(baselineFile);
// ftpUtil.saveFile(spectrumPathProperties.getRootPath()+middleData.analyses_baseline_absolute_filePath, in);
// } catch (FileNotFoundException e) {
// throw new RuntimeException(e);
// }
// }
// {
// File lcFile = new File(rootPath+middleData.analyses_lc_absolute_filePath);
// try {
// FileInputStream in = new FileInputStream(lcFile);
// ftpUtil.saveFile(spectrumPathProperties.getRootPath()+middleData.analyses_lc_absolute_filePath, in);
// } catch (FileNotFoundException e) {
// throw new RuntimeException(e);
// }
// }
// {
// File scacFile = new File(rootPath+middleData.analyses_scac_absolute_filePath);
// try {
// FileInputStream in = new FileInputStream(scacFile);
// ftpUtil.saveFile(spectrumPathProperties.getRootPath()+middleData.analyses_scac_absolute_filePath, in);
// } catch (FileNotFoundException e) {
// throw new RuntimeException(e);
// }
// }
{
String baselinePathName = ftpUtil.getFtpRootPath()+middleData.analyses_baseline_absolute_filePath.substring(0, middleData.analyses_baseline_absolute_filePath.lastIndexOf(StringPool.SLASH));
String baselineFileName = middleData.analyses_baseline_absolute_filePath.substring(middleData.analyses_baseline_absolute_filePath.lastIndexOf(StringPool.SLASH) + 1);
File baselineFile = new File(rootPath+middleData.analyses_baseline_absolute_filePath);
try {
FileInputStream in = new FileInputStream(baselineFile);
ftpUtil.saveFile(baselinePathName, baselineFileName, in);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
}
}
{
String lcPathName = ftpUtil.getFtpRootPath()+middleData.analyses_lc_absolute_filePath.substring(0, middleData.analyses_lc_absolute_filePath.lastIndexOf(StringPool.SLASH));
String lcFileName = middleData.analyses_lc_absolute_filePath.substring(middleData.analyses_lc_absolute_filePath.lastIndexOf(StringPool.SLASH) + 1);
File lcFile = new File(rootPath+middleData.analyses_lc_absolute_filePath);
try {
FileInputStream in = new FileInputStream(lcFile);
ftpUtil.saveFile(lcPathName, lcFileName, in);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
}
}
{
String scacPathName = ftpUtil.getFtpRootPath()+middleData.analyses_scac_absolute_filePath.substring(0, middleData.analyses_scac_absolute_filePath.lastIndexOf(StringPool.SLASH));
String scacFileName = middleData.analyses_scac_absolute_filePath.substring(middleData.analyses_scac_absolute_filePath.lastIndexOf(StringPool.SLASH) + 1);
File scacFile = new File(rootPath+middleData.analyses_scac_absolute_filePath);
try {
FileInputStream in = new FileInputStream(scacFile);
ftpUtil.saveFile(scacPathName, scacFileName, in);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
}
}
{
String logPathName = middleData.analyses_absolute_LogPath.substring(0, middleData.analyses_absolute_LogPath.lastIndexOf(StringPool.SLASH));
String logFileName = middleData.analyses_absolute_LogPath.substring(middleData.analyses_absolute_LogPath.lastIndexOf(StringPool.SLASH)+1);
File logFile = new File(logFileName);
try {
FileUtil.writeString(gammaFileUtil.GetLogContent(middleData), logFile, "UTF-8");
FileInputStream in = new FileInputStream(logFile);
ftpUtil.saveFile(logPathName, logFileName, in);
ftpUtil.saveFile(spectrumPathProperties.getRootPath()+middleData.analyses_absolute_LogPath, in);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
} finally {
@ -4858,13 +4832,12 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
}
}
{
String rptPathName = middleData.analyses_absolute_ReportPath.substring(0, middleData.analyses_absolute_ReportPath.lastIndexOf(StringPool.SLASH));
String rptFileName = middleData.analyses_absolute_ReportPath.substring(middleData.analyses_absolute_ReportPath.lastIndexOf(StringPool.SLASH)+1)+".txt";
File rptFile = new File(rptFileName);
try {
FileUtil.writeString(gammaFileUtil.GetReportContent(middleData), rptFile, "UTF-8");
FileInputStream in = new FileInputStream(rptFile);
ftpUtil.saveFile(rptPathName, rptFileName, in);
ftpUtil.saveFile(spectrumPathProperties.getRootPath()+middleData.analyses_absolute_ReportPath+".txt", in);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
} finally {

94
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/service/impl/SpectrumAnalysisServiceImpl.java
View File

@ -299,7 +299,7 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
Result result = new Result();
List<Map<String, Object>> resultList = new LinkedList<>();
String userName = JwtUtil.getUserNameByToken(request);
String filePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH +userName;
String filePath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH +userName;
String sampleRx = "[a-zA-Z]{3}[0-9]{2}_[0-9]{3}-[0-9]{8}_[0-9]{4}_S_(FULL_|PREL_)\\d+\\.PHD";
Pattern regexPattern = Pattern.compile(sampleRx);
String sampleRx1 = "[a-zA-Z]{3}[0-9]{2}_[0-9]{3}-[0-9]{8}_[0-9]{4}_S_(FULL_|PREL_)\\d+\\.\\d+\\.PHD";
@ -480,9 +480,9 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
betaDataFile.setSampleId(String.valueOf(sampleId));
//判断sample信息是否存在
if (Objects.nonNull(sample)) {
betaDataFile.setSampleFilePathName(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbSpectrumFilePath.getSampleFilePath());
betaDataFile.setSampleFilePathName(spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbSpectrumFilePath.getSampleFilePath());
betaDataFile.setSampleFileName(sampleFileName);
sampleTmp = ftpUtil.downloadFile(betaDataFile.getSampleFilePathName(), "betaGamma");
sampleTmp = ftpUtil.downloadFile(betaDataFile.getSampleFilePathName());
if (Objects.nonNull(sampleTmp)) {
//sample临时文件路径存储
betaDataFile.setSampleTmpPath(sampleTmp.getAbsolutePath());
@ -517,9 +517,9 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
}
//判断gas信息是否存在
if (Objects.nonNull(gasBg)) {
betaDataFile.setGasFilePathName(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbSpectrumFilePath.getGasBgFilePath());
betaDataFile.setGasFilePathName(spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbSpectrumFilePath.getGasBgFilePath());
betaDataFile.setGasFileName(gasFileName);
gasTmp = ftpUtil.downloadFile(betaDataFile.getGasFilePathName(), "betaGamma");
gasTmp = ftpUtil.downloadFile(betaDataFile.getGasFilePathName());
if (Objects.nonNull(gasTmp)) {
//存储gas临时文件路径
betaDataFile.setGasTmpPath(gasTmp.getAbsolutePath());
@ -554,9 +554,9 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
}
//判断det信息是否存在
if (Objects.nonNull(detBg)) {
betaDataFile.setDetFilePathName(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbSpectrumFilePath.getDetBgFilePath());
betaDataFile.setDetFilePathName(spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbSpectrumFilePath.getDetBgFilePath());
betaDataFile.setDetFileName(detFileName);
detTmp = ftpUtil.downloadFile(betaDataFile.getDetFilePathName(), "betaGamma");
detTmp = ftpUtil.downloadFile(betaDataFile.getDetFilePathName());
if (Objects.nonNull(detTmp)) {
//存储det临时文件路径
betaDataFile.setDetTmpPath(detTmp.getAbsolutePath());
@ -591,9 +591,9 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
}
//判断qc信息是否存在
if (Objects.nonNull(qc)) {
betaDataFile.setQcFilePathName(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbQcFilePath);
betaDataFile.setQcFilePathName(spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH +dbQcFilePath);
betaDataFile.setQcFileName(qcFileName);
qcTmp = ftpUtil.downloadFile(betaDataFile.getQcFilePathName(), "betaGamma");
qcTmp = ftpUtil.downloadFile(betaDataFile.getQcFilePathName());
if (Objects.nonNull(qcTmp)) {
betaDataFile.setQcTmpPath(qcTmp.getAbsolutePath());
EnergySpectrumStruct struct = EnergySpectrumHandler.getSourceData(qcTmp.getAbsolutePath());
@ -671,7 +671,7 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
//获取用户名
String userName = JwtUtil.getUserNameByToken(request);
//上传文件路径
String path = ftpUtil.getFtpRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
String path = spectrumPathProperties.getRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName;
Map<String, Object> resultMap = new HashMap<>();
Map<String, Object> sampleMap = new HashMap<>();
Map<String, Object> gasBgMap = new HashMap<>();
@ -783,7 +783,7 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
File file = null;
try {
//根据完整的文件路径 获取临时文件
file = ftpUtil.downloadFile(filePathName, "betaGamma");
file = ftpUtil.downloadFile(filePathName);
if (Objects.nonNull(file)) {
if (type.equalsIgnoreCase("sample")) {
betaDataFile.setSampleTmpPath(file.getAbsolutePath());
@ -880,26 +880,6 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
String betaKey = sampleFileName + "-" + userName;
Cache<String, BetaDataFile> cache = betaCache.getBetaCache();
BetaDataFile betaDataFile = cache.getIfPresent(betaKey);
String sampleTmpPath = betaDataFile.getSampleTmpPath();
if (StringUtils.isNotBlank(sampleTmpPath)) {
File file = new File(sampleTmpPath);
file.delete();
}
String gasTmpPath = betaDataFile.getGasTmpPath();
if (StringUtils.isNotBlank(gasTmpPath)) {
File file = new File(gasTmpPath);
file.delete();
}
String detTmpPath = betaDataFile.getDetTmpPath();
if (StringUtils.isNotBlank(detTmpPath)) {
File file = new File(detTmpPath);
file.delete();
}
String qcTmpPath = betaDataFile.getQcTmpPath();
if (StringUtils.isNotBlank(qcTmpPath)) {
File file = new File(qcTmpPath);
file.delete();
}
betaCache.deleteBetaCache(betaKey);
}
@ -948,7 +928,7 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
InputStream inputStream = null;
ServletOutputStream outputStream = null;
try {
inputStream = ftpUtil.downloadFileStream(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + reportPath + ".txt");
inputStream = ftpUtil.downloadFileStream(spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + reportPath + ".txt");
if (Objects.nonNull(inputStream)){
outputStream = response.getOutputStream();
byte[] buffer = new byte[1024];
@ -4023,7 +4003,7 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
InputStream inputStream = null;
ServletOutputStream outputStream = null;
try {
inputStream = ftpUtil.downloadFileStream(ftpUtil.getFtpRootPath() + spectrumPathProperties.getLogPath() + StringPool.SLASH + logPath);
inputStream = ftpUtil.downloadFileStream(spectrumPathProperties.getRootPath() + spectrumPathProperties.getLogPath() + StringPool.SLASH + logPath);
if (Objects.nonNull(inputStream)){
outputStream = response.getOutputStream();
byte[] buffer = new byte[1024];
@ -4302,26 +4282,41 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
}
//上传本次文件到ftp人工交互存储路径下
try {
if (StringUtils.isNotBlank(betaDataFile.getSampleTmpPath())) {
File sampleTmp = new File(betaDataFile.getSampleTmpPath());
ftpUtil.saveFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + sampleFilePathName.substring(0, sampleFilePathName.lastIndexOf(StringPool.SLASH)), anlyseResultIn.getSampleFileName(), new FileInputStream(sampleTmp));
if (StringUtils.isNotBlank(sampleFilePathName)) {
//sample文件的saveFile存储路径
String saveSamplePath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + sampleFilePathName;
if (StringUtils.isNotBlank(betaDataFile.getSampleTmpPath()) && !saveSamplePath.equals(betaDataFile.getSampleTmpPath().replace(StringPool.BACK_SLASH, StringPool.SLASH))) {
File sampleTmp = new File(betaDataFile.getSampleTmpPath());
ftpUtil.saveFile(saveSamplePath, new FileInputStream(sampleTmp));
}
}
if (StringUtils.isNotBlank(betaDataFile.getGasTmpPath())) {
File gasTmp = new File(betaDataFile.getGasTmpPath());
ftpUtil.saveFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + gasFilePathName.substring(0, gasFilePathName.lastIndexOf(StringPool.SLASH)), anlyseResultIn.getGasFileName(), new FileInputStream(gasTmp));
if (StringUtils.isNotBlank(gasFilePathName)) {
//gas文件的saveFile存储路径
String saveGasPath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + gasFilePathName;
if (StringUtils.isNotBlank(betaDataFile.getGasTmpPath()) && !saveGasPath.equals(betaDataFile.getGasTmpPath().replace(StringPool.BACK_SLASH, StringPool.SLASH))) {
File gasTmp = new File(betaDataFile.getGasTmpPath());
ftpUtil.saveFile(saveGasPath, new FileInputStream(gasTmp));
}
}
if (StringUtils.isNotBlank(betaDataFile.getDetTmpPath())) {
File detTmp = new File(betaDataFile.getDetTmpPath());
ftpUtil.saveFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + detFilePathName.substring(0, detFilePathName.lastIndexOf(StringPool.SLASH)), anlyseResultIn.getDetFileName(), new FileInputStream(detTmp));
if (StringUtils.isNotBlank(detFilePathName)) {
//det文件的saveFile存储路径
String saveDetPath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + detFilePathName;
if (StringUtils.isNotBlank(betaDataFile.getDetTmpPath()) && !saveDetPath.equals(betaDataFile.getDetTmpPath().replace(StringPool.BACK_SLASH, StringPool.SLASH))) {
File detTmp = new File(betaDataFile.getDetTmpPath());
ftpUtil.saveFile(saveDetPath, new FileInputStream(detTmp));
}
}
if (StringUtils.isNotBlank(betaDataFile.getQcTmpPath())) {
File qcTmp = new File(betaDataFile.getQcTmpPath());
ftpUtil.saveFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + qcFilePathName.substring(0, qcFilePathName.lastIndexOf(StringPool.SLASH)), anlyseResultIn.getQcFileName(), new FileInputStream(qcTmp));
if (StringUtils.isNotBlank(qcFilePathName)) {
//qc文件的saveFile存储路径
String saveQcPath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + qcFilePathName;
if (StringUtils.isNotBlank(betaDataFile.getQcTmpPath()) && !saveQcPath.equals(betaDataFile.getQcTmpPath().replace(StringPool.BACK_SLASH, StringPool.SLASH))) {
File qcTmp = new File(betaDataFile.getQcTmpPath());
ftpUtil.saveFile(saveQcPath, new FileInputStream(qcTmp));
}
}
//分析成功后存储日志文件和报告文件
{
String logPathName = analyses_absolute_LogPath.substring(0, analyses_absolute_LogPath.lastIndexOf(StringPool.SLASH));
String logFileName = analyses_absolute_LogPath.substring(analyses_absolute_LogPath.lastIndexOf(StringPool.SLASH)+1);
String logFileName = betaDataFile.getSampleFileName().replace("PHD", "log");
//获取日志的文件存放路径
String logFilePath = parameterProperties.getLogFilePath() + File.separator + DateUtils.formatDate(new Date(), "yyyy-MM-dd");
String localLogName = betaDataFile.getSampleFileName().replace("PHD", "log");
@ -4337,20 +4332,19 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
FileUtil.writeString("", logFile, "UTF-8");
}
FileInputStream in = new FileInputStream(logFile);
ftpUtil.saveFile(logPathName, logFileName, in);
ftpUtil.saveFile(spectrumPathProperties.getRootPath()+analyses_absolute_LogPath, in);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
}
}
{
String rptContent = phdFileUtil.OutPutRnRpt(betaDataFile);
String rptPathName = analyses_absolute_ReportPath.substring(0, analyses_absolute_ReportPath.lastIndexOf(StringPool.SLASH));
String rptFileName = analyses_absolute_ReportPath.substring(analyses_absolute_ReportPath.lastIndexOf(StringPool.SLASH)+1)+".txt";
File rptFile = new File(rptFileName);
try {
FileUtil.writeString(rptContent, rptFile, "UTF-8");
FileInputStream in = new FileInputStream(rptFile);
ftpUtil.saveFile(rptPathName, rptFileName, in);
ftpUtil.saveFile(spectrumPathProperties.getRootPath()+analyses_absolute_ReportPath+".txt", in);
} catch (FileNotFoundException e) {
throw new RuntimeException(e);
} finally {

77
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/service/impl/SpectrumFileServiceImpl.java
View File

@ -53,31 +53,49 @@ public class SpectrumFileServiceImpl implements ISpectrumFileService {
@Override
public Result<?> upload(MultipartFile file) {
//压缩包文件名称
String filename = file.getOriginalFilename();
//判断是否是压缩包文件
boolean isZip = filename.endsWith(FileTypeEnum.zip.getType());
if (!isZip) return Result.error(Prompt.FILE_TYPE_ERR);
//如果不是压缩包文件 返回错误提示信息
if (!isZip) {
return Result.error(Prompt.FILE_TYPE_ERR);
}
//获取登陆用户名
LoginUser user = (LoginUser)SecurityUtils.getSubject().getPrincipal();
String username = user.getUsername();
FTPClient ftpClient = null;
// FTPClient ftpClient = null;
//获取文件输出流
FileOutputStream fos = null;
//获取压缩包文件输入流
ZipInputStream zipInputStream = null;
String slash = SymbolConstant.SINGLE_SLASH;
//上传文件夹路径
String filePath = spectrumPathProperties.getUploadPath() + slash + username;
String filePath = spectrumPathProperties.getRootPath() + slash + spectrumPathProperties.getUploadPath() + slash + username;
//本地临时文件夹路径
String tempFilePath = System.getProperty("java.io.tmpdir") + username + slash;
//文件名称集合
List<String> fileNames = new ArrayList<>();
//文件集合
List<File> fileList = new ArrayList<>();
//正则表达式
String sampleRx = "[a-zA-Z]{3}[0-9]{2}_[0-9]{3}-[0-9]{8}_[0-9]{4}_(S|G|D|Q)_(FULL_|PREL_)\\d+\\.PHD";
Pattern regexPattern = Pattern.compile(sampleRx);
String sampleRx1 = "[a-zA-Z]{3}[0-9]{2}_[0-9]{3}-[0-9]{8}_[0-9]{4}_(S|G|D|Q)_(FULL_|PREL_)\\d+\\.\\d+\\.PHD";
Pattern regexPattern1 = Pattern.compile(sampleRx1);
try{
//创建本地临时文件夹
File tempDir = new File(tempFilePath);
if (!tempDir.exists()) tempDir.mkdir();
//判断本地临时文件夹是否存在
if (!tempDir.exists()) {
tempDir.mkdir();
}
//创建输入流
zipInputStream = new ZipInputStream(file.getInputStream());
ZipEntry entry;
//遍历获取压缩包内文件
while (ObjectUtil.isNotNull(entry = zipInputStream.getNextEntry())) {
//文件名称
String fileName = entry.getName();
fileNames.add(fileName);
File oneFile = new File(tempFilePath + fileName);
@ -89,46 +107,61 @@ public class SpectrumFileServiceImpl implements ISpectrumFileService {
}
fileList.add(oneFile);
}
if (CollUtil.isEmpty(fileList))
//判断文件集合是否为空
if (CollUtil.isEmpty(fileList)) {
return Result.error(Prompt.FILE_IS_EMPTY);
ftpClient = ftpUtil.LoginFTP();
if (ObjectUtil.isNull(ftpClient))
return Result.error(Prompt.FTP_ERR);
// 如果指定目录不存在,逐级创建目录
boolean created = FTPUtil.createDirs(ftpClient, filePath);
if (!created) return Result.error(Prompt.DIR_CREATE_FAIL + filePath);
}
// //登陆ftp
// ftpClient = ftpUtil.LoginFTP();
// if (ObjectUtil.isNull(ftpClient)) {
// return Result.error(Prompt.FTP_ERR);
// }
// // 如果指定目录不存在,逐级创建目录
// boolean created = FTPUtil.createDirs(ftpClient, filePath);
// if (!created) {
// return Result.error(Prompt.DIR_CREATE_FAIL + filePath);
// }
// 上传所有文件
List<String> failList = new ArrayList<>();
for (File oneFile : fileList) {
String fileName = oneFile.getName();
// 判断能谱文件名称是否符合规则，不符合则进行重命名
if (!regexPattern.matcher(fileName).find() && !regexPattern1.matcher(fileName).find()) {
//分析文件
EnergySpectrumStruct struct = phdFileUtil.analyzeFileSourceData(oneFile);
//获取文件后缀
String suffix = nameStandUtil.GetSuffix(struct.data_type, struct.spectrum_quantity, String.valueOf(struct.acquisition_live_time));
//获取文件名称
fileName = nameStandUtil.GetFileNameFromDateTime(struct.measurement_id, suffix);
}
String fullFilePath = filePath + slash + fileName;
FileInputStream local = new FileInputStream(oneFile);
boolean success = ftpClient.storeFile(fileName, local);
if (!success) failList.add(fullFilePath);
boolean success = ftpUtil.saveFile(fullFilePath, local);
if (!success) {
failList.add(fullFilePath);
}
}
if (CollUtil.isNotEmpty(failList))
if (CollUtil.isNotEmpty(failList)) {
return Result.error(Prompt.UPLOAD_ERR, failList);
}
return Result.OK(Prompt.UPLOAD_SUCC);
} catch (IOException e) {
e.printStackTrace();
return Result.error(Prompt.UPLOAD_ERR);
}finally {
try {
if (ObjectUtil.isNotNull(zipInputStream))
if (ObjectUtil.isNotNull(zipInputStream)) {
zipInputStream.close();
if (ObjectUtil.isNotNull(fos))
}
if (ObjectUtil.isNotNull(fos)) {
fos.close();
if (ObjectUtil.isNotNull(ftpClient))
if (ftpClient.isConnected()){
ftpClient.logout();
ftpClient.disconnect();
}
}
// if (ObjectUtil.isNotNull(ftpClient)) {
// if (ftpClient.isConnected()){
// ftpClient.logout();
// ftpClient.disconnect();
// }
// }
} catch (IOException e) {
e.printStackTrace();
}
@ -143,7 +176,7 @@ public class SpectrumFileServiceImpl implements ISpectrumFileService {
String username = user.getUsername();
String slash = SymbolConstant.SINGLE_SLASH;
String comma = SymbolConstant.COMMA;
String filePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getUploadPath() + slash + username;
String filePath = spectrumPathProperties.getRootPath() + spectrumPathProperties.getUploadPath() + slash + username;
FTPClient ftpClient = null;
List<FileDto> fileDtos = new ArrayList<>();
Page<FileDto> page = new Page<>(pageNo, pageSize);

6
jeecg-module-web-statistics/src/main/java/org/jeecg/common/util/ReadLineUtil.java
View File

@ -34,7 +34,7 @@ public class ReadLineUtil {
File file = null;
try {
filePath = ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + filePath;
file = ftpUtil.downloadFile(filePath, "betaGamma");
file = ftpUtil.downloadFile(filePath);
//判断文件路径是否为空
if (Objects.nonNull(file)){
List<String> allLines = FileUtils.readLines(file, encoding);
@ -52,10 +52,6 @@ public class ReadLineUtil {
}
} catch (IOException e) {
throw new RuntimeException(e);
} finally {
if (Objects.nonNull(file)) {
file.delete();
}
}
return Collections.emptyMap();
}

2
jeecg-module-web-statistics/src/main/java/org/jeecg/modules/service/impl/GardsSampleDataWebServiceImpl.java
View File

@ -133,7 +133,7 @@ public class GardsSampleDataWebServiceImpl extends ServiceImpl<GardsSampleDataWe
GardsSampleDataWeb sampleData = getOneSample(sampleId);
String filePath = sampleData.getInputFileName();
if (StringUtils.isNotBlank(filePath)) {
file = ftpUtil.downloadFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + filePath, "betaGamma");
file = ftpUtil.downloadFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getSaveFilePath() + StringPool.SLASH + filePath);
if (Objects.nonNull(file)) {
EnergySpectrumStruct sourceData = EnergySpectrumHandler.getSourceData(file.getAbsolutePath());
//查询info

3
jeecg-server-cloud/armd-log-manage-start/src/main/resources/application.yml
View File

@ -15,4 +15,5 @@ spring:
config:
import:
- optional:nacos:armd.yaml
- optional:nacos:armd-@profile.name@.yaml
- optional:nacos:armd-@profile.name@.yaml
- optional:nacos:armd-analysis-@profile.name@.yaml