From 7e1839ebc062801c7bf0a91b2ef3c6748fd62057 Mon Sep 17 00:00:00 2001
From: orgin <feixingyuanup@gmail.com>
Date: Thu, 21 Sep 2023 19:58:46 +0800
Subject: [PATCH] =?UTF-8?q?fix:=20=E4=BC=98=E5=8C=96ReadBaseCtrlInfo?=
 =?UTF-8?q?=E6=96=B9=E6=B3=95?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 .../org/jeecg/common/util/GammaFileUtil.java  | 108 +++++++++++++++++-
 1 file changed, 105 insertions(+), 3 deletions(-)

diff --git a/jeecg-module-spectrum-analysis/src/main/java/org/jeecg/common/util/GammaFileUtil.java b/jeecg-module-spectrum-analysis/src/main/java/org/jeecg/common/util/GammaFileUtil.java
index 5caf617a..945ea4dd 100644
--- a/jeecg-module-spectrum-analysis/src/main/java/org/jeecg/common/util/GammaFileUtil.java
+++ b/jeecg-module-spectrum-analysis/src/main/java/org/jeecg/common/util/GammaFileUtil.java
@@ -31,9 +31,7 @@ import org.xml.sax.SAXException;
 import javax.xml.parsers.DocumentBuilder;
 import javax.xml.parsers.DocumentBuilderFactory;
 import javax.xml.parsers.ParserConfigurationException;
-import java.io.File;
-import java.io.IOException;
-import java.io.InputStream;
+import java.io.*;
 import java.math.BigDecimal;
 import java.math.RoundingMode;
 import java.text.DecimalFormat;
@@ -482,6 +480,110 @@ public class GammaFileUtil {
         }
     }
 
+    public void ReadBaseCtrlInfo(PHDFile phd, InputStream in){
+        try {
+            BufferedReader reader = new BufferedReader(new InputStreamReader(in));
+            String line ;
+            String block_name = null;
+            HashMap<String, List<Double>> map = new HashMap<>();
+            while (null != (line = reader.readLine())) {
+                if (line.contains("#")) {
+                    block_name = line.trim();
+                    map.put(block_name, new LinkedList<>());
+                    continue;
+                }
+                List<Double> data = map.get(block_name);
+                String[] split = line.split("\\s+");
+                for(String str : split) {
+                    if (StringUtils.isNotBlank(str) && !str.equalsIgnoreCase("nan")){
+                        double d = Double.parseDouble(str);
+                        data.add(d);
+                    } else if (StringUtils.isNotBlank(str) && str.equalsIgnoreCase("nan")) {
+                        data.add(0.0);
+                    }
+                }
+            }
+            if(map.containsKey("#AnalyseRange")) {
+                List<Double> vTemp = map.get("#AnalyseRange");
+                if(vTemp.size() == 2) {
+                    phd.getBaseCtrls().setRg_low(vTemp.get(0).intValue());
+                    phd.getBaseCtrls().setRg_high(vTemp.get(1).intValue());
+                }
+            } else if(map.containsKey("#XCtrl")) {
+                List<Double> vTemp = map.get("#XCtrl");
+                phd.getBaseCtrls().setXCtrl(vTemp);
+            } else if(map.containsKey("#YCtrl")) {
+                List<Double> vTemp = map.get("#YCtrl");
+                phd.getBaseCtrls().setYCtrl(vTemp);
+            } else if(map.containsKey("#YSlope")) {
+                List<Double> vTemp = map.get("#YSlope");
+                phd.getBaseCtrls().setYSlope(vTemp);
+            } else if(map.containsKey("#Baseline")) {
+                List<Double> vTemp = map.get("#Baseline");
+                List<Double> list = vTemp.subList(1, vTemp.size());
+                phd.getBaseCtrls().setBaseline(list);
+            } else if(map.containsKey("#StepCounts")) {
+                List<Double> vTemp = map.get("#StepCounts");
+                List<Double> list = vTemp.subList(1, vTemp.size());
+                phd.getBaseCtrls().setStepCounts(list);
+            }
+        } catch (IOException e) {
+            e.printStackTrace();
+        }
+    }
+
+    public void ReadBaseCtrlInfo(PHDFile phd, InputStream in){
+        try {
+            BufferedReader reader = new BufferedReader(new InputStreamReader(in));
+            String line ;
+            String block_name = null;
+            HashMap<String, List<Double>> map = new HashMap<>();
+            while (null != (line = reader.readLine())) {
+                if (line.contains("#")) {
+                    block_name = line.trim();
+                    map.put(block_name, new LinkedList<>());
+                    continue;
+                }
+                List<Double> data = map.get(block_name);
+                String[] split = line.split("\\s+");
+                for(String str : split) {
+                    if (StringUtils.isNotBlank(str) && !str.equalsIgnoreCase("nan")){
+                        double d = Double.parseDouble(str);
+                        data.add(d);
+                    } else if (StringUtils.isNotBlank(str) && str.equalsIgnoreCase("nan")) {
+                        data.add(0.0);
+                    }
+                }
+            }
+            if(map.containsKey("#AnalyseRange")) {
+                List<Double> vTemp = map.get("#AnalyseRange");
+                if(vTemp.size() == 2) {
+                    phd.getBaseCtrls().setRg_low(vTemp.get(0).intValue());
+                    phd.getBaseCtrls().setRg_high(vTemp.get(1).intValue());
+                }
+            } else if(map.containsKey("#XCtrl")) {
+                List<Double> vTemp = map.get("#XCtrl");
+                phd.getBaseCtrls().setXCtrl(vTemp);
+            } else if(map.containsKey("#YCtrl")) {
+                List<Double> vTemp = map.get("#YCtrl");
+                phd.getBaseCtrls().setYCtrl(vTemp);
+            } else if(map.containsKey("#YSlope")) {
+                List<Double> vTemp = map.get("#YSlope");
+                phd.getBaseCtrls().setYSlope(vTemp);
+            } else if(map.containsKey("#Baseline")) {
+                List<Double> vTemp = map.get("#Baseline");
+                List<Double> list = vTemp.subList(1, vTemp.size());
+                phd.getBaseCtrls().setBaseline(list);
+            } else if(map.containsKey("#StepCounts")) {
+                List<Double> vTemp = map.get("#StepCounts");
+                List<Double> list = vTemp.subList(1, vTemp.size());
+                phd.getBaseCtrls().setStepCounts(list);
+            }
+        } catch (IOException e) {
+            e.printStackTrace();
+        }
+    }
+
     public boolean getResultFromDB(String dbName, String userName, Integer sampleId, PHDFile phd, Result result) {
         //判断连接的数据库
         String T_analy, T_calib, T_peaks, T_param, T_nuc_line, T_nuc_act, T_qc, T_setting;