fix: 人工交互模块Beta分析失败的情况下返回内容修改
人工交互模块Gamma部分无效的接口删除
This commit is contained in:
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ba7bd409f3
commit
797552ea9c
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@ -33,12 +33,6 @@ public class GammaController {
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gammaService.initValue(sampleId, dbName, analyst, fileName, request);
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gammaService.initValue(sampleId, dbName, analyst, fileName, request);
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}
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}
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@GetMapping("testFun")
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public Result testFun(String fileName,HttpServletRequest request){
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return gammaService.testFun(fileName, request);
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}
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@GetMapping("gammaByDB")
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@GetMapping("gammaByDB")
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@ApiOperation(value = "gamma页面loadFromDB加载数据", notes = "gamma页面loadFromDB加载数据")
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@ApiOperation(value = "gamma页面loadFromDB加载数据", notes = "gamma页面loadFromDB加载数据")
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public Result gammaByDB(Integer sampleId, String dbName, String analyst, HttpServletRequest request){
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public Result gammaByDB(Integer sampleId, String dbName, String analyst, HttpServletRequest request){
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@ -17,8 +17,6 @@ public interface IGammaService{
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void initValue(Integer sampleId, String dbName, String analyst, String fileName, HttpServletRequest request);
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void initValue(Integer sampleId, String dbName, String analyst, String fileName, HttpServletRequest request);
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Result testFun(String fileName, HttpServletRequest request);
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Result gammaByDB(String dbName, Integer sampleId, String analyst, HttpServletRequest request);
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Result gammaByDB(String dbName, Integer sampleId, String analyst, HttpServletRequest request);
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Result gammaByFile(String fileName, HttpServletRequest request);
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Result gammaByFile(String fileName, HttpServletRequest request);
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@ -164,219 +164,6 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
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}
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}
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}
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}
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@Override
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public Result testFun(String fileName, HttpServletRequest request) {
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Result result = new Result();
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String userName = JwtUtil.getUserNameByToken(request);
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Cache<String, PHDFile> phdCache = localCache.getPHDCache();
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PHDFile phd = phdCache.getIfPresent(fileName + StringPool.DASH + userName);
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phd.setUserId("1");
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phd.setXmlFilePath(parameterProperties.getFilePath());
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String systemType = fileName.substring(2, 3);
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if (Objects.isNull(phd)) {
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result.error500("Please select the parse file first!");
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return result;
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}
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Map<String, NuclideLines> nuclideLinesMap = (Map<String, NuclideLines>) redisUtil.get(userName+StringPool.DASH+phd.getHeader().getSystem_type());
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// 解析获取临时文件信息
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File tmpFile = gammaFileUtil.analyzeFile(ftpUtil.getFtpRootPath() + spectrumPathProperties.getUploadPath() + StringPool.SLASH + userName, fileName);
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ObjectMapper mapper = new ObjectMapper();
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try {
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String phdStr = mapper.writeValueAsString(phd);
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String mapLines = mapper.writeValueAsString(nuclideLinesMap);
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String strValue = CalValuesHandler.analyseSpectrum(phdStr, mapLines, tmpFile.getAbsolutePath(), new AnalysisProcess());
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Map<String, Object> parseMap = JSON.parseObject(strValue, Map.class);
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for (Map.Entry<String, Object> entry : parseMap.entrySet()) {
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if (entry.getKey().equalsIgnoreCase("bAnalyed")) {
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boolean value = JSON.parseObject(JSON.toJSONString(entry.getValue()), Boolean.class);
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phd.setBAnalyed(value);
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}
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if (entry.getKey().equalsIgnoreCase("mapEnerPara")) {
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HashMap<String, Object> jsonMap = JSON.parseObject(JSON.toJSONString(entry.getValue()), HashMap.class);
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Map<String, ParameterInfo> value = new HashMap<>();
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for (Map.Entry<String, Object> objectEntry : jsonMap.entrySet()) {
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String key = objectEntry.getKey();
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ParameterInfo entryValue = JSON.parseObject(JSON.toJSONString(objectEntry.getValue()), ParameterInfo.class);
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value.put(key, entryValue);
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}
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phd.setMapEnerPara(value);
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}
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if (entry.getKey().equalsIgnoreCase("mapResoPara")) {
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HashMap<String, Object> jsonMap = JSON.parseObject(JSON.toJSONString(entry.getValue()), HashMap.class);
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Map<String, ParameterInfo> value = new HashMap<>();
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for (Map.Entry<String, Object> objectEntry : jsonMap.entrySet()) {
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String key = objectEntry.getKey();
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ParameterInfo entryValue = JSON.parseObject(JSON.toJSONString(objectEntry.getValue()), ParameterInfo.class);
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value.put(key, entryValue);
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}
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phd.setMapResoPara(value);
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}
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if (entry.getKey().equalsIgnoreCase("mapEffiPara")) {
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HashMap<String, Object> jsonMap = JSON.parseObject(JSON.toJSONString(entry.getValue()), HashMap.class);
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Map<String, ParameterInfo> value = new HashMap<>();
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for (Map.Entry<String, Object> objectEntry : jsonMap.entrySet()) {
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String key = objectEntry.getKey();
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ParameterInfo entryValue = JSON.parseObject(JSON.toJSONString(objectEntry.getValue()), ParameterInfo.class);
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value.put(key, entryValue);
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}
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phd.setMapEffiPara(value);
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}
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if (entry.getKey().equalsIgnoreCase("mapTotEPara")) {
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HashMap<String, Object> jsonMap = JSON.parseObject(JSON.toJSONString(entry.getValue()), HashMap.class);
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Map<String, ParameterInfo> value = new HashMap<>();
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for (Map.Entry<String, Object> objectEntry : jsonMap.entrySet()) {
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String key = objectEntry.getKey();
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ParameterInfo entryValue = JSON.parseObject(JSON.toJSONString(objectEntry.getValue()), ParameterInfo.class);
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value.put(key, entryValue);
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}
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phd.setMapTotEPara(value);
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}
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if (entry.getKey().equalsIgnoreCase("para_stepRatio")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setPara_stepRatio(value);
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}
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if (entry.getKey().equalsIgnoreCase("para_tail")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setPara_tail(value);
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}
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if (entry.getKey().equalsIgnoreCase("para_tailAlpha")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setPara_tailAlpha(value);
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}
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if (entry.getKey().equalsIgnoreCase("para_tailRight")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setPara_tailRight(value);
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}
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if (entry.getKey().equalsIgnoreCase("para_tailRightAlpha")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setPara_tailRightAlpha(value);
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}
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if (entry.getKey().equalsIgnoreCase("newEner")) {
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String value = JSON.parseObject(JSON.toJSONString(entry.getValue()), String.class);
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phd.setNewEner(value);
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}
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if (entry.getKey().equalsIgnoreCase("newReso")) {
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String value = JSON.parseObject(JSON.toJSONString(entry.getValue()), String.class);
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phd.setNewReso(value);
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}
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if (entry.getKey().equalsIgnoreCase("mapEnerKD")) {
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HashMap<String, Object> jsonMap = JSON.parseObject(JSON.toJSONString(entry.getValue()), HashMap.class);
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Map<String, GEnergyBlock> value = new HashMap<>();
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for (Map.Entry<String, Object> objectEntry : jsonMap.entrySet()) {
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String key = objectEntry.getKey();
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GEnergyBlock entryValue = JSON.parseObject(JSON.toJSONString(objectEntry.getValue()), GEnergyBlock.class);
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value.put(key, entryValue);
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}
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phd.setMapEnerKD(value);
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}
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if (entry.getKey().equalsIgnoreCase("mapResoKD")) {
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HashMap<String, Object> jsonMap = JSON.parseObject(JSON.toJSONString(entry.getValue()), HashMap.class);
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Map<String, GResolutionBlock> value = new HashMap<>();
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for (Map.Entry<String, Object> objectEntry : jsonMap.entrySet()) {
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String key = objectEntry.getKey();
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GResolutionBlock entryValue = JSON.parseObject(JSON.toJSONString(objectEntry.getValue()), GResolutionBlock.class);
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value.put(key, entryValue);
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}
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phd.setMapResoKD(value);
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}
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if (entry.getKey().equalsIgnoreCase("vEnergy")) {
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List<Double> value = JSON.parseArray(JSON.toJSONString(entry.getValue()), Double.class);
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phd.setVEnergy(value);
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}
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if (entry.getKey().equalsIgnoreCase("vBase")) {
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List<Double> value = JSON.parseArray(JSON.toJSONString(entry.getValue()), Double.class);
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phd.setVBase(value);
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}
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if (entry.getKey().equalsIgnoreCase("vLc")) {
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List<Double> value = JSON.parseArray(JSON.toJSONString(entry.getValue()), Double.class);
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phd.setVLc(value);
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}
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if (entry.getKey().equalsIgnoreCase("vScac")) {
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List<Double> value = JSON.parseArray(JSON.toJSONString(entry.getValue()), Double.class);
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phd.setVScac(value);
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}
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if (entry.getKey().equalsIgnoreCase("vPeak")) {
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List<PeakInfo> value = JSON.parseArray(JSON.toJSONString(entry.getValue()), PeakInfo.class);
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phd.setVPeak(value);
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}
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if (entry.getKey().equalsIgnoreCase("baseCtrls")) {
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BaseControls value = JSON.parseObject(JSON.toJSONString(entry.getValue()), BaseControls.class);
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phd.setBaseCtrls(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedEner")) {
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String value = JSON.parseObject(JSON.toJSONString(entry.getValue()), String.class);
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phd.setUsedEner(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedEnerKD")) {
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GEnergyBlock value = JSON.parseObject(JSON.toJSONString(entry.getValue()), GEnergyBlock.class);
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phd.setUsedEnerKD(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedEnerPara")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setUsedEnerPara(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedReso")) {
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String value = JSON.parseObject(JSON.toJSONString(entry.getValue()), String.class);
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phd.setUsedReso(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedResoKD")) {
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GResolutionBlock value = JSON.parseObject(JSON.toJSONString(entry.getValue()), GResolutionBlock.class);
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phd.setUsedResoKD(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedResoPara")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setUsedResoPara(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedEffi")) {
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String value = JSON.parseObject(JSON.toJSONString(entry.getValue()), String.class);
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phd.setUsedEffi(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedEffiKD")) {
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GEfficiencyBlock value = JSON.parseObject(JSON.toJSONString(entry.getValue()), GEfficiencyBlock.class);
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phd.setUsedEffiKD(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedEffiPara")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setUsedEffiPara(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedTotE")) {
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String value = JSON.parseObject(JSON.toJSONString(entry.getValue()), String.class);
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phd.setUsedTotE(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedTotEKD")) {
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TotaleffBlock value = JSON.parseObject(JSON.toJSONString(entry.getValue()), TotaleffBlock.class);
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phd.setUsedTotEKD(value);
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}
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if (entry.getKey().equalsIgnoreCase("usedTotEPara")) {
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ParameterInfo value = JSON.parseObject(JSON.toJSONString(entry.getValue()), ParameterInfo.class);
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phd.setUsedTotEPara(value);
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}
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}
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BeanUtils.copyProperties(phd.getSetting(), phd.getUsedSetting());
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for (PeakInfo info:phd.getVPeak()) {
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if (Objects.isNull(info.recoilBetaChan)) {
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info.recoilBetaChan = "nan";
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}
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if (Objects.isNull(info.recoilDeltaChan)) {
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info.recoilDeltaChan = "nan";
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}
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}
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// 重新分析各峰值对应的核素信息
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gammaFileUtil.NuclidesIdent(phd, nuclideLinesMap);
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gammaFileUtil.RunQC(phd);
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result.setResult(phd);
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} catch (JsonProcessingException e) {
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throw new RuntimeException(e);
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} finally {
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if (Objects.nonNull(tmpFile)) {
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tmpFile.delete();
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}
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}
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result.setSuccess(true);
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return result;
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}
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@Override
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@Override
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public Result gammaByDB(String dbName, Integer sampleId, String analyst, HttpServletRequest request) {
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public Result gammaByDB(String dbName, Integer sampleId, String analyst, HttpServletRequest request) {
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Result result = new Result();
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Result result = new Result();
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@ -3268,17 +3268,11 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
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return result;
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return result;
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}
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}
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map = BetaGammaAnalyzeCurrentProcess(analyseData, betaDataFile);
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map = BetaGammaAnalyzeCurrentProcess(analyseData, betaDataFile);
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map.put("bProcessed", true);
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map.put("savedAnalysisResult", true);
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result.setSuccess(true);
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result.setSuccess(true);
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result.setResult(map);
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result.setResult(map);
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} else if ("AllSpectrum".equals(analyseData.getApplyType())) {
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} else if ("AllSpectrum".equals(analyseData.getApplyType())) {
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//获取当前选中的文件名称
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//获取当前选中的文件名称
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map = BetaGammaAnalyzeAllProcess(analyseData, userName, currentFileName);
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map = BetaGammaAnalyzeAllProcess(analyseData, userName, currentFileName);
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if (CollectionUtils.isNotEmpty(map)) {
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map.put("bProcessed", true);
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map.put("savedAnalysisResult", true);
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}
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result.setSuccess(true);
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result.setSuccess(true);
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result.setResult(map);
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result.setResult(map);
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}
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}
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@ -3473,6 +3467,8 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
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betaDataFile.setSaveAnalysisResult(true);
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betaDataFile.setSaveAnalysisResult(true);
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betaDataFile.setBgPara(spectrum_group.BgCalPara);
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betaDataFile.setBgPara(spectrum_group.BgCalPara);
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}
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}
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xeMap.put("bProcessed", true);
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xeMap.put("savedAnalysisResult", true);
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} else {
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} else {
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List<Boundary> sampleBoundary = (List<Boundary>) xeMap.get("SampleBoundary");
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List<Boundary> sampleBoundary = (List<Boundary>) xeMap.get("SampleBoundary");
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if(CollectionUtils.isNotEmpty(sampleBoundary)) {
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if(CollectionUtils.isNotEmpty(sampleBoundary)) {
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@ -3490,7 +3486,11 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
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if(CollectionUtils.isNotEmpty(qcBoundary)) {
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if(CollectionUtils.isNotEmpty(qcBoundary)) {
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betaDataFile.setQcBoundary(qcBoundary);
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betaDataFile.setQcBoundary(qcBoundary);
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}
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}
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betaDataFile.setBProcessed(false);
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betaDataFile.setSaveAnalysisResult(false);
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xeMap.put("XeData", Collections.EMPTY_LIST);
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xeMap.put("XeData", Collections.EMPTY_LIST);
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xeMap.put("bProcessed", false);
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xeMap.put("savedAnalysisResult", false);
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}
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}
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}
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}
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} catch (Exception e) {
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} catch (Exception e) {
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@ -3704,6 +3704,8 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
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sampleBetaData.setSaveAnalysisResult(true);
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sampleBetaData.setSaveAnalysisResult(true);
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sampleBetaData.setBgPara(spectrum_group.BgCalPara);
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sampleBetaData.setBgPara(spectrum_group.BgCalPara);
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}
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}
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xeMap.put("bProcessed", true);
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xeMap.put("savedAnalysisResult", true);
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analyseResultMap.put(sampleFileName, xeMap);
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analyseResultMap.put(sampleFileName, xeMap);
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} else {
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} else {
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List<Boundary> sampleBoundary = (List<Boundary>) xeMap.get("SampleBoundary");
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List<Boundary> sampleBoundary = (List<Boundary>) xeMap.get("SampleBoundary");
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@ -3722,7 +3724,11 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
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if(CollectionUtils.isNotEmpty(qcBoundary)) {
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if(CollectionUtils.isNotEmpty(qcBoundary)) {
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sampleBetaData.setQcBoundary(qcBoundary);
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sampleBetaData.setQcBoundary(qcBoundary);
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}
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}
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sampleBetaData.setBProcessed(false);
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sampleBetaData.setSaveAnalysisResult(false);
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xeMap.put("XeData", Collections.EMPTY_LIST);
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xeMap.put("XeData", Collections.EMPTY_LIST);
|
||||||
|
xeMap.put("bProcessed", false);
|
||||||
|
xeMap.put("savedAnalysisResult", false);
|
||||||
analyseResultMap.put(sampleFileName, xeMap);
|
analyseResultMap.put(sampleFileName, xeMap);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
@ -3848,6 +3854,10 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
|
||||||
betaDataFile.setQcBoundary(qcBoundary);
|
betaDataFile.setQcBoundary(qcBoundary);
|
||||||
}
|
}
|
||||||
map.put("XeData", Collections.EMPTY_LIST);
|
map.put("XeData", Collections.EMPTY_LIST);
|
||||||
|
betaDataFile.setBProcessed(false);
|
||||||
|
betaDataFile.setSaveAnalysisResult(false);
|
||||||
|
map.put("bProcessed", false);
|
||||||
|
map.put("savedAnalysisResult", false);
|
||||||
}
|
}
|
||||||
} catch (Exception e) {
|
} catch (Exception e) {
|
||||||
e.printStackTrace();
|
e.printStackTrace();
|
||||||
|
@ -3969,6 +3979,10 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
|
||||||
betaDataFile.setQcBoundary(qcBoundary);
|
betaDataFile.setQcBoundary(qcBoundary);
|
||||||
}
|
}
|
||||||
map.put("XeData", Collections.EMPTY_LIST);
|
map.put("XeData", Collections.EMPTY_LIST);
|
||||||
|
betaDataFile.setBProcessed(false);
|
||||||
|
betaDataFile.setSaveAnalysisResult(false);
|
||||||
|
map.put("bProcessed", false);
|
||||||
|
map.put("savedAnalysisResult", false);
|
||||||
mapList.put(sampleFileName, map);
|
mapList.put(sampleFileName, map);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
Loading…
Reference in New Issue
Block a user