xiaoguangbin/AnalysisSystemForRadionuclide
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Merge remote-tracking branch 'origin/station' into station

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nieziyan 2023-11-15 20:10:22 +08:00
commit 146ac310e4
9 changed files with 60 additions and 46 deletions
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38
jeecg-module-beta-gamma-analyser/src/main/java/org/jeecg/common/util/GammaFileUtil.java
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@ -253,30 +253,32 @@ public class GammaFileUtil extends AbstractLogOrReport {
String lcFileName = prefixName+"_"+subFileName + ".lc";
String fromPathLc = pathName + StringPool.SLASH + lcFileName;
lcFile = ftpUtil.downloadFile(fromPathLc, "betaGamma");
List<String> readLinesLc = FileUtils.readLines(lcFile, "UTF-8");
//得到行数据处理后的数据结果
List<Double> vDataLc = ReadLcScacInfo(readLinesLc);
//将数据结果赋值给 phdFile的vLc
phd.setVLc(vDataLc);
if (Objects.nonNull(lcFile)) {
List<String> readLinesLc = FileUtils.readLines(lcFile, "UTF-8");
//得到行数据处理后的数据结果
List<Double> vDataLc = ReadLcScacInfo(readLinesLc);
//将数据结果赋值给 phdFile的vLc
phd.setVLc(vDataLc);
}
String scacFileName = prefixName+"_"+subFileName + ".scac";
String fromPathScac = pathName + StringPool.SLASH + scacFileName;
scacFile = ftpUtil.downloadFile(fromPathScac, "betaGamma");
List<String> readLinesScac = FileUtils.readLines(scacFile, "UTF-8");
//得到行数据处理后的数据结果
List<Double> vDataScac = ReadLcScacInfo(readLinesScac);
//将数据结果赋值给 phdFile的vLc
phd.setVScac(vDataScac);
if (Objects.nonNull(scacFile)) {
List<String> readLinesScac = FileUtils.readLines(scacFile, "UTF-8");
//得到行数据处理后的数据结果
List<Double> vDataScac = ReadLcScacInfo(readLinesScac);
//将数据结果赋值给 phdFile的vLc
phd.setVScac(vDataScac);
}
String baselineFileName = prefixName+"_"+subFileName + ".baseline";
String fromPathBase = pathName + StringPool.SLASH + baselineFileName;
inputStreamBase = ftpUtil.downloadFileStream(fromPathBase);
// 调用处理BaseCtrl的方法
ReadBaseCtrlInfo(phd, inputStreamBase);
// 将phdFile的BaseCtrls的BaseLine部分数据 赋值给 phdFile的vBase
phd.setVBase(phd.getBaseCtrls().getBaseline());
if (Objects.nonNull(inputStreamBase)) {
// 调用处理BaseCtrl的方法
ReadBaseCtrlInfo(phd, inputStreamBase);
// 将phdFile的BaseCtrls的BaseLine部分数据 赋值给 phdFile的vBase
phd.setVBase(phd.getBaseCtrls().getBaseline());
}
}catch (IOException e){
e.printStackTrace();
} finally {

10
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/controller/GammaController.java
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@ -24,12 +24,6 @@ public class GammaController {
@Autowired
private IGammaService gammaService;
@Autowired
private RedisTemplate<String, Object> redisTemplate;
@Autowired
private SystemClient systemClient;
@GetMapping("initValue")
@ApiOperation(value = "初始化gamma数据", notes = "初始化gamma数据")
public Result initValue(Integer sampleId, String dbName, String analyst, String fileName, HttpServletRequest request) {
@ -83,8 +77,8 @@ public class GammaController {
@PostMapping("Reprocessing")
@ApiOperation(value = "analyze菜单下Reprocessing页面数据", notes = "analyze菜单下Reprocessing页面数据")
public Result Reprocessing(String fileName, HttpServletRequest request) {
return gammaService.Reprocessing(fileName, request);
public Result Reprocessing(String fileName, String processKey, HttpServletRequest request) {
return gammaService.Reprocessing(fileName, processKey, request);
}
@GetMapping("InteractiveTool")

6
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/controller/SpectrumAnalysesController.java
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@ -24,6 +24,12 @@ public class SpectrumAnalysesController {
@Autowired
private ISpectrumAnalysisService spectrumAnalysisService;
@GetMapping("initValue")
@ApiOperation(value = "初始化数据", notes = "初始化数据")
public Result initValue(String dbName, Integer sampleId, String analyst, String sampleFileName, String gasFileName, String detFileName, String qcFileName, HttpServletRequest request) {
return spectrumAnalysisService.initValue(dbName, sampleId, analyst, sampleFileName, gasFileName, detFileName, qcFileName, request);
}
@GetMapping("getDBSearchList")
@ApiOperation(value = "查询查询条件数据接口", notes = "查询查询条件数据接口")
public Result getDBSearchList(HttpServletRequest request, boolean AllUsers) {

3
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/entity/GardsSampleDataSpectrum.java
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@ -34,6 +34,9 @@ public class GardsSampleDataSpectrum extends GardsSampleData {
@TableField(exist = false)
private String analyst;
@TableField(exist = false)
private Integer analysitId;
@TableField(exist = false)
@Excel(name = "NO" ,orderNum = "1")
private Integer no;

1
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/mapper/xml/SpectrumAnalysisMapper.xml
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@ -42,6 +42,7 @@
c.acquisition_start acquisitionStart,
c.acquisition_real_sec acquisitionRealSec,
c.acquisition_live_sec acquisitionLiveSec,
d.IDANALYSIS analysitId,
d.analyst analyst,
c.status status,
c.input_file_name inputFileName

2
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/service/IGammaService.java
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@ -30,7 +30,7 @@ public interface IGammaService{
Result configureSave(ConfigureData configureData, HttpServletRequest request);
Result Reprocessing(String fileName, HttpServletRequest request);
Result Reprocessing(String fileName, String processKey, HttpServletRequest request);
Result InteractiveTool(Integer sampleId, String fileName, HttpServletRequest request);

2
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/service/ISpectrumAnalysisService.java
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@ -14,6 +14,8 @@ import java.util.List;
public interface ISpectrumAnalysisService {
Result initValue(String dbName, Integer sampleId, String analyst, String sampleFileName, String gasFileName, String detFileName, String qcFileName, HttpServletRequest request);
Result getDBSearchList(HttpServletRequest request, boolean AllUsers);
Result getDBSpectrumList(QueryRequest queryRequest, GardsSampleDataSpectrum gardsSampleData, String dbName, String[] menuTypes, boolean AllUsers, boolean CollectStopB, boolean AcqStartB, Date startDate, Date endDate, HttpServletRequest request);

6
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/service/impl/GammaServiceImpl.java
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@ -1024,7 +1024,7 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
}
@Override
public Result Reprocessing(String fileName, HttpServletRequest request) {
public Result Reprocessing(String fileName, String processKey, HttpServletRequest request) {
Result result = new Result();
String userName = JwtUtil.getUserNameByToken(request);
Cache<String, PHDFile> phdCache = localCache.getPHDCache();
@ -1033,9 +1033,7 @@ public class GammaServiceImpl extends AbstractLogOrReport implements IGammaServi
result.error500("Please select the parse file first！");
return result;
}
// 获取当前用户信息
LoginUser sysUser = (LoginUser) SecurityUtils.getSubject().getPrincipal();
phd.setUserId(sysUser.getId());
phd.setUserId(processKey);
// 赋值xml文件存放路径
phd.setXmlFilePath(parameterProperties.getFilePath());
// 获取当前角色的颜色配置

38
jeecg-module-spectrum-analysis/src/main/java/org/jeecg/modules/service/impl/SpectrumAnalysisServiceImpl.java
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@ -110,6 +110,14 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
private IGardsHistogramSpectrumService histogramService;
@Override
public Result initValue(String dbName, Integer sampleId, String analyst, String sampleFileName, String gasFileName, String detFileName, String qcFileName, HttpServletRequest request) {
if (StringUtils.isNotBlank(dbName) && Objects.nonNull(sampleId)) {
return getDBSpectrumChart(dbName, sampleId, analyst, request);
} else {
return getFileSpectrumChart(sampleFileName, gasFileName, detFileName, qcFileName, request);
}
}
@Override
public Result getDBSearchList(HttpServletRequest request, boolean AllUsers) {
@ -342,24 +350,9 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
if (dbName.equalsIgnoreCase("auto")){
dbName = "RNAUTO";
analysisID = spectrumAnalysisMapper.getAnalysisID(dbName, sampleId, "RNAUTO");
xeResultsSpectrumList = spectrumAnalysisMapper.ReadXeResults(dbName, analysisID, sampleId);
gammaCalibrationSpectrumList = spectrumAnalysisMapper.ReadGammaCalibrationParam("RNAUTO", analysisID);
betaCalibrationSpectrumList = spectrumAnalysisMapper.ReadBetaCalibrationParam("RNAUTO", analysisID);
roiChannelsSpectrumList = spectrumAnalysisMapper.ReadROIChannels("RNAUTO", analysisID, sampleId);
roiResultsSpectrumList = spectrumAnalysisMapper.ReadROIResults("RNAUTO", analysisID, sampleId);
} else if (dbName.equalsIgnoreCase("man")){
dbName = "RNMAN";
analysisID = spectrumAnalysisMapper.getAnalysisID(dbName, sampleId, analyst);
gammaCalibrationPairsList = spectrumAnalysisMapper.ReadGammaFitChannelEnergy(analysisID, sampleId);
betaCalibrationPairsList = spectrumAnalysisMapper.ReadBetaFitChannelEnergy(analysisID, sampleId);
xeResultsSpectrumList = spectrumAnalysisMapper.ReadXeResults(dbName, analysisID, sampleId);
gammaCalibrationSpectrumList = spectrumAnalysisMapper.ReadGammaCalibrationParam("RNMAN", analysisID);
betaCalibrationSpectrumList = spectrumAnalysisMapper.ReadBetaCalibrationParam("RNMAN", analysisID);
roiChannelsSpectrumList = spectrumAnalysisMapper.ReadROIChannels("RNMAN", analysisID, sampleId);
roiResultsSpectrumList = spectrumAnalysisMapper.ReadROIResults("RNMAN", analysisID, sampleId);
}else {
result.error500("The database type does not exist");
return result;
}
File sampleTmp = null;
File gasTmp = null;
@ -411,6 +404,21 @@ public class SpectrumAnalysisServiceImpl extends AbstractLogOrReport implements
//如果缓存中没有公用变量的数据
if (Objects.isNull(betaDataFile)) {
betaDataFile = new BetaDataFile();
if (dbName.equalsIgnoreCase("RNAUTO")) {
xeResultsSpectrumList = spectrumAnalysisMapper.ReadXeResults(dbName, analysisID, sampleId);
gammaCalibrationSpectrumList = spectrumAnalysisMapper.ReadGammaCalibrationParam("RNAUTO", analysisID);
betaCalibrationSpectrumList = spectrumAnalysisMapper.ReadBetaCalibrationParam("RNAUTO", analysisID);
roiChannelsSpectrumList = spectrumAnalysisMapper.ReadROIChannels("RNAUTO", analysisID, sampleId);
roiResultsSpectrumList = spectrumAnalysisMapper.ReadROIResults("RNAUTO", analysisID, sampleId);
} else {
gammaCalibrationPairsList = spectrumAnalysisMapper.ReadGammaFitChannelEnergy(analysisID, sampleId);
betaCalibrationPairsList = spectrumAnalysisMapper.ReadBetaFitChannelEnergy(analysisID, sampleId);
xeResultsSpectrumList = spectrumAnalysisMapper.ReadXeResults(dbName, analysisID, sampleId);
gammaCalibrationSpectrumList = spectrumAnalysisMapper.ReadGammaCalibrationParam("RNMAN", analysisID);
betaCalibrationSpectrumList = spectrumAnalysisMapper.ReadBetaCalibrationParam("RNMAN", analysisID);
roiChannelsSpectrumList = spectrumAnalysisMapper.ReadROIChannels("RNMAN", analysisID, sampleId);
roiResultsSpectrumList = spectrumAnalysisMapper.ReadROIResults("RNMAN", analysisID, sampleId);
}
//给公用变量赋值sampleId
betaDataFile.setSampleId(String.valueOf(sampleId));
//用于记录文件路径信息